LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele01g0527	ATGGGATCACTTATCCAGATTGACTCCATCTCCATAGATCTTGCCAATTCTATTGAAAAGAGTGATGTAGGAAAATGTGATCATCATTTCTCAATACGTGGATATGTATCTGAAATTCGTAAAAAGGACTGGAAATTGTGTTGGCCATTTCCATTAAAAGGCAACCACGGTGAGTCTGAGGATCAGCCATGTTTGCTTCCACCATTAGATGTACCCAAATTCAGACGTTGGCGCTGTCAAACTTGTCAGCAAGAAATTGCTGCTGAAGGAAGTGACAAAGATAACCAAGGAGAATTTCATTCTTGCTGTACTAGATGCAAATCTGCTAGCAATTGCTTTAATAATGCAACTGTCAGGTCTGATATTCAGCTACAGCTCGCTTCAACACACGACACAGGAATTGACCTTAATAGTTCTGCTGGTTTGAGCTGTGGAAATGATTGCTTACGGGCTAATAATGAGAAAGAAAAGAAAGTTGAAGTTGTATACAACAGAATGATAGAGCATGAGACTGGCGTGGAGAGTAAGCTTAATAATCAAATAGCTAGTGTTCCACCACCTGAAGTTCATCCATGGCTCATACCGGAAGCACCTACAAATGATAAAGGTTTTGAAGGTAATGAAGTTTCTGATGTTAAGCTTGCTACAAGCAATCTCAAATGTGCAGGCCAGAATTCTTCTGAGTTTTTTTACGGAGGAACACTTATTTCTGCTCGTGACCAATGCCAGAAAGAACTAAACAAAAGTGGTACAATTTCAGACGTTGGCAAGGTTGTTGTTGTGGCAGACCATACTACTGATGACACAGCTGGGCGTTCCCCTATCGAGTCAGTTGCTAGTCAAAAGGCTTTACCTAGAATTACAGAAAATTTGGTTGAAAATGATTTTAAGGATCATAATCTAGAAAAGTCATCTGATTTGCCTCGTAGGAAGCCTCGAAAGGTGCGCCTGCTAACTGACTTATTAAGTGAAAATGTGGAGGCAAAGACTGAAAAGTTTGGTCTACAAGAATTCTCATCTGATGGTACTTCCGAGGCATCAGCAACTTTACAGACGCTGCCAACATCTGTTCAGGGAGACTTGACAAATATGGATAAGAGTGTAAAACAGGCTTTTCCGGATGAAGAGCTGAAACCTGCTGACATTTCCTCACATAGGGTCGATAATGAAGGTCAAAACTTGGAGGGAGATGCGGAAGTAAATGACACTATTCCAGGTACTGGATTTAAAGATGTGTATTCCACAATAGGTTTACAAGAAATTGTTAAGAGCTACTGGAGTAAACCTGAAATTGATAGAAGCCTTACCATGGGTAAGAAGAAGAAGAAGATGCAAGTTGTTGACAAACATTTGAGATCTTATCCATACCAAAATGAGGAGAATATGCCTGTTATGAGTAAGGCATATGCATCTAAAACCCTCTCTCTCACATCACCTTCTTGCGAATTTTCAGAAAAAGGGATGGATAGCTTTCCTTCGCATGCTCTAAAATTAGGAAATGAATGCAATTTGTCCAAACAAAAAGGGAAAATGCTGCAAGTTGATGGGGATCAGGCTTCCTTATCTTGTTGGAAAACTGACAAGCTTGTAGAAGATTCTTTTGCTGTTACAGGAGCAAAATTAACGTCAAATATGCCTGTAGCAGTTCCAATTCCTTCAGCACAAGGTTCCATACCAAATGAAAATGGAATACAAGTGGGACTTCATCTCTCTCCAAACAGTTATTTCGCAGCTCAGGCTCACTACAAAAAGTGCACAAGTCAAATTGATAATCAACTACGTTTCTCATTGTCTTCACAAGAGAGCTCATCAAAAGTACATAATCATGTAAGGAAAGGCAGAGAAACTGATGTTGGAGAGCCAAACATTCCTTACAAGCCGATAACAGATGCTATTTCTGATAAAAGGTTAAGTTGTGAAGTAAGTAGAAATAAAAAGCCCCTTAAAATGCTTTTTCCTAATAAGAAGCATAAGTACGCCCCACAGGTTGAAGATGGGAATCATTTCCAGGACAAGCAAATGGAAATTACTGGTTCAAAAAACACACAAAAACCAGTTGAAGCTCTGGAACATGCCAGTGTCATGAAAACCAATTGTGATCAGATAGCTGACAAAGTGTCTGAGCAGGGGACGTTAGATGATATACCCATAGAAATTGTAGAATTGATGGCAAAGAATCAACATGAGAGGCGTCTTTCTGAAGCAGAAAATAGAAGCTGTCAGCTGACAAGATGTAATTGTGAAAGGAAAGCACAGATGATAGTTAGCACTGACGTTTATGGAAAAGGGGAATTAACCTTGTTACAAGAGGGTCAGAAAGGAAAACCTCAGGGAAGACATGGGGAAAATGGCATGACCTCGTGGGGAGAGAATGTGAGGCCAGGCAAAAGAAAGTCAGTTCACTACTTTTCTCCAATTGATGATAGAAACCATTTGAATAGGAATAGTCTTTGTCAACCTCAGTCCTCCTTTGCATTTGAAGTTTCCAATTCCCAAAAGAGGCTACCAAATGGATTTCATTTTTCACCCATGGGATCCAGCCTTTGTGGTAATGCTCAAAATTGCAAGATGAATGGGAGTAATGCAGAGCGTGTACCCACTGATTCTATTTTTCAGGTCCAGGGAGGATGTAGCTTACACAAGACTACTTTACACCCAGATGACAAAGCTTCTCATATTTGGGCATCCTTGACCCCAAGTCATTTGTCCCTGGGATATGATATATCCAAAAGGGATGCTTCTCAATCTAGTCGAACTGCTATAGATATGACTTCACTCCAAACTGACACGCTACATAAGCAGAACATGAACAAGGATGTTGATCTTAATTGCTTGAATTTAAATGCAACTGGCCTTGAAAAGCTTAATAGGAATGCGGATTCTGGAACCTTCAATAGGAATGTTGATTATCCATTTCCATGCAAACATAATGGAATAGAGCCTCAACAAAATATGAGGGGATCTCTGGATTCATATTCTAACGAGATAATACCAGCCATGCATTTACTCAGCCTTATGGATGCAGGTATGAAGTCCATTAAACCCACCAATGGTTGTGCCAGTGATCAAGTATTTGATAGACCCTCTTATCATGGTGATTGTAATAGTAAATTGGAGATTGATAAGGTTCTCATTTCTCTGAAAAAGCCACCATCCGATTATTACAACAAGAATCACTTATCAAATAAATCACATGGTTGTTTTCTTGGTTCACCAACCTTAGGTGTATCTTCATCAGTCCAGCATAAAGAGAAATTTATTAAAGCTAGTAGCTTCAATAATCAAACATCCACAAAGTCTGGAAAGAAGGAAAAGATTAAGAGCTTCAAGCAGGTCTTGCAGAATAGAGGGAATAAGCCCTTTAGTTGGACATACGTTGAAACAGAAACAGAAACTCCAGTGCAACGTAAATTGGAAGTTCGTGGTAGTTGTGTAACCTTGGCGCCTTCAAAAGACCGTTATACTTCCAACTCTTGCAGTATAAATAGAAACCCGGCTGATTTCACCCTGCCAGATGTGTGGAATATCTTTATGATCAGAGGGGAAGATTTGAAATTTGAGAAGCCTCATAATCCCAAGGAAAGGCCCAGCTTGGTTAGTTTTCAGGGATGCAAACAGCAGAGAAATTTGAAGGAAACCAAAATAAAGGATCATGAAAAGTGGTGA	3666	0.3972	MGSLIQIDSISIDLANSIEKSDVGKCDHHFSIRGYVSEIRKKDWKLCWPFPLKGNHGESEDQPCLLPPLDVPKFRRWRCQTCQQEIAAEGSDKDNQGEFHSCCTRCKSASNCFNNATVRSDIQLQLASTHDTGIDLNSSAGLSCGNDCLRANNEKEKKVEVVYNRMIEHETGVESKLNNQIASVPPPEVHPWLIPEAPTNDKGFEGNEVSDVKLATSNLKCAGQNSSEFFYGGTLISARDQCQKELNKSGTISDVGKVVVVADHTTDDTAGRSPIESVASQKALPRITENLVENDFKDHNLEKSSDLPRRKPRKVRLLTDLLSENVEAKTEKFGLQEFSSDGTSEASATLQTLPTSVQGDLTNMDKSVKQAFPDEELKPADISSHRVDNEGQNLEGDAEVNDTIPGTGFKDVYSTIGLQEIVKSYWSKPEIDRSLTMGKKKKKMQVVDKHLRSYPYQNEENMPVMSKAYASKTLSLTSPSCEFSEKGMDSFPSHALKLGNECNLSKQKGKMLQVDGDQASLSCWKTDKLVEDSFAVTGAKLTSNMPVAVPIPSAQGSIPNENGIQVGLHLSPNSYFAAQAHYKKCTSQIDNQLRFSLSSQESSSKVHNHVRKGRETDVGEPNIPYKPITDAISDKRLSCEVSRNKKPLKMLFPNKKHKYAPQVEDGNHFQDKQMEITGSKNTQKPVEALEHASVMKTNCDQIADKVSEQGTLDDIPIEIVELMAKNQHERRLSEAENRSCQLTRCNCERKAQMIVSTDVYGKGELTLLQEGQKGKPQGRHGENGMTSWGENVRPGKRKSVHYFSPIDDRNHLNRNSLCQPQSSFAFEVSNSQKRLPNGFHFSPMGSSLCGNAQNCKMNGSNAERVPTDSIFQVQGGCSLHKTTLHPDDKASHIWASLTPSHLSLGYDISKRDASQSSRTAIDMTSLQTDTLHKQNMNKDVDLNCLNLNATGLEKLNRNADSGTFNRNVDYPFPCKHNGIEPQQNMRGSLDSYSNEIIPAMHLLSLMDAGMKSIKPTNGCASDQVFDRPSYHGDCNSKLEIDKVLISLKKPPSDYYNKNHLSNKSHGCFLGSPTLGVSSSVQHKEKFIKASSFNNQTSTKSGKKEKIKSFKQVLQNRGNKPFSWTYVETETETPVQRKLEVRGSCVTLAPSKDRYTSNSCSINRNPADFTLPDVWNIFMIRGEDLKFEKPHNPKERPSLVSFQGCKQQRNLKETKIKDHEKW	1221

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele01g0527	1221	MobiDBLite	consensus disorder prediction	771	794	-	-
	Lele01g0527	1221	MobiDBLite	consensus disorder prediction	600	626	-	-
	Lele01g0527	1221	PANTHER	PROTEIN EMBRYONIC FLOWER 1	2	1216	IPR034583	GO:0009910\|GO:0045892\|GO:0048367
	Lele01g0527	1221	MobiDBLite	consensus disorder prediction	605	619	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele01g0527	Lele-ChrLele01	3133970	3138518	Dispersed/Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lele01g0527	01	3133970	3138518	Lele01g0527	01	3133970	3138518	ECH
	Lele01g0527	01	3133970	3138518	Lele03g0535	03	3160114	3164666	hybridization
	Lele01g0527	01	3133970	3138518	Lele04g0536	04	3234142	3238723	hybridization