Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0525 ATGGCCATGGCGATTAGGTCTTTTTTCGTTCTTCTGTTGTTTCTCTCGGGTGCCTACTTTAGCTTTTCGCTTTATGAAGATCAAGTTGGCCTTATGGATTGGCACCAGCAGTACATTGGGAAAGTAAAACATGCTGTGTTTCATACTCAAAAGACTGGACGAAAGCGTGTTTTGGTGTCCACTGAAGAGAATGTTCTTGCTTCTCTTGACCTTCGTCATGGGGAAATTTTTTGGAGGCATGTTCTTGGGACCAACGATGTAATCAATGGACTTGACATTGCCCTGGGAAAATATGTTATTACTCTTTCCTCTGATGGTAGTATATTGAGAGCATGGAACCTTCCTGATGGCCAGATGGTTTGGGAGTCTTTCCTTCCTGGCTCAAAGGCTTCAAAGTCAATACTAACTATTCCTAAAAATTTGAAGGCAGACAGGGATGATTTGATCCTTGTTTTTGGTAATGGATGTCTTCATGCTGTTTCCAGCAAAGATGGTGAGATACTTTGGAAGAAAGATTTTGCAAGTGAAAGCATTGATGTCCAGCATCTTATTCAGTCTCCTCATGATGATATAATCTATGTAGCTGGTTTTTCTGGCTCTTCAAAATTTTTTGTGCATCAGTTCAAAGCCAAGAATGGAGACTTGTTAAAGCATACTGATGCAGGACTTCCATGTGGCACTTTTGGGGAATTATTATCAGTCTCCAATGACATGCTTGTGTTATTGGATGATATCAGGTCAAAGATAGTAACAATAAACATCAGGAATGGAGATATTAACTACAGCCAGAAGTATATTTCAGAGTTCATTGAGGATTCATCTGGACAGGCAGTAATTTTACCATCAAAGCTTCCGGGAATGTTTGCTTTAAATCTTGATTCCCATATTATCCTTCTTAAATTGACAAATGAAGGTGAGTTGGTGGTGGGGGAGAAAATACACAATGTCGCAGCTATTAGTGATGCTCTATCAATTTCAGAGGGCCGGCATGCTTTTGCATTTGTTCAACATGGAGACAATAAAGTTCACCTTTATGTAAAGGATGTCAATGCTAATGATTTGAACGGTGACTTTCTTAAAGAAAGCATAGTAATAGACAATCAAACAGGGTATGTTGAGAAAATTTATATAAACAACTACGTCAGAACAGACAGATCAAATGGGTTTAGGGCATTGATGGTAATGGAGGATCATTCACTTATATTAGTACAACAAGGAGAGATTGTTTGGAGTAGAGAGGATGGTCTTGCTGCAGTTGTAGATGTGACAGCATCAGAACTACCTGTGGAAAAGGAAGGTGTATCTGTAGCAAAAGTTGAACAGAATCTCTTTGAATGGCTCAAGGGACACATGCTGAAGCTCAAAGGAACCTTAATGATTGCAAGCCCAGAGGATGTAGCAGCAATCCAAGCAATGAGGTTGAGGAGTTCTGGGAAAAGCAAAATGACTCGTGATCATAATGGTTTCCGTAAGTTACTTATAGTGCTTACCAGGGCAGGAAAAGTTTTTGCCTTGCACACTGGAGATGGGCATGTAGTTTGGTCTGTGCTATTACGCAATCTACGTAAATCTGAAGCATGTGAACATCCAGTTGGGATTAATATTTATCAGTGGCAGGTTCCACATCACCATGCATTGGATGAGAATCCTTCTGTCCTTGTAGTTGGGCGATGTGGCTCAAGTTTGTCTGCACCAGCTGTTCTTTCTTTTATTGATGCATACACGGGAATGGAACTAAATGCTTTGAGTCTTTTTCATACCATTGCTCAAGTTATTCCACTGCCTTACACCGATTCAAAAGAACAGCGTCTCCATCTAATAATAGATGTTGACCAGAAAGCTCATTTATACCCCAGAACACCCGAAGCTATTGAAATTCTGCAACATGGGTTTTCAAATGTGTACTGGTACTCAGTTGAGGTGGATAATGGTATTATTAGAGGTCATGCCTTAAAGAGTAATTGCATTGGTGAAGTAGTGGATGAATATTGCTTTTTCTTCAGGGACTTATGGTCTGTTGTATTCCCATCTGAATCTGAAAAGATCATAGCAACTATGACGAGAAAATCAAATGAGGTGGTTCATACTCAAGCAAAAGTCATGGCTGACCAAGACGTCATGTACAAGTATATATCAAGTAATCTGCTTTTTGTTGCAAATGTGGCACCAAAAGCCAGAGGTGAAATTGGAACAGCAACACCAGAGGAGGCATGGCTGGTTGTATATATCATTGATACTGTAACTGGCCGCATATTGCATCGCATGACTCATCAGGGTTGTCAGGGTCCTGTTCATGCTGTATTTAGTGAAAACTGGGTTGTGTACCATTATTTTAATCTCAGAGCACACAGATATGAGATGTCAGTTGTTGAAGTCTATGATCAATCTCGAGCGGATAACAAAGACGTTTGGAAGCTTATTCTTGGAAAGCATAATCTTACGTCTCCTGTCACTTCATACTCTCGACCAGAAGTCATAGCTAAATCACAATCGTACTTCTTTACCCATTCTGTGAAAGCAATGGAAGTGACTTCAACCGTCAAGGGCATAACCTCCCAACAACTTCTTATTGGAACAATTGGTGATCAGGTTTTGGCCCTTGATAAACGTTATTTGGATCCTAGGCGAACACTCAATCCCTCGCAAGCTGAGAAAGAAGAAGGAATTATTCCTCTTACTGATTCCTTACCGATTATTTCTCAGTCTTACATTACGCATTCCCTTAAAGTGGAAGGTCTCCGACGAATAATAACAGTACCTGCCAAGTTGGAGTCGACATCACTGGTCTTTGCCTATGGAGTAGATCTATTCTTTACTCGGATAGCACCTTCAAGGACTTATGATTCTTTAACCGAAGATTTCAGCTATGCGCTACTTCTCATCACAATTGTTGCACTTGTAGTAGCAATTTTTGTTACTTGGGTATTATCAGAGAAGAAAGAACTACAAGATAAGTGGAGGTGA 2964 0.4018 MAMAIRSFFVLLLFLSGAYFSFSLYEDQVGLMDWHQQYIGKVKHAVFHTQKTGRKRVLVSTEENVLASLDLRHGEIFWRHVLGTNDVINGLDIALGKYVITLSSDGSILRAWNLPDGQMVWESFLPGSKASKSILTIPKNLKADRDDLILVFGNGCLHAVSSKDGEILWKKDFASESIDVQHLIQSPHDDIIYVAGFSGSSKFFVHQFKAKNGDLLKHTDAGLPCGTFGELLSVSNDMLVLLDDIRSKIVTINIRNGDINYSQKYISEFIEDSSGQAVILPSKLPGMFALNLDSHIILLKLTNEGELVVGEKIHNVAAISDALSISEGRHAFAFVQHGDNKVHLYVKDVNANDLNGDFLKESIVIDNQTGYVEKIYINNYVRTDRSNGFRALMVMEDHSLILVQQGEIVWSREDGLAAVVDVTASELPVEKEGVSVAKVEQNLFEWLKGHMLKLKGTLMIASPEDVAAIQAMRLRSSGKSKMTRDHNGFRKLLIVLTRAGKVFALHTGDGHVVWSVLLRNLRKSEACEHPVGINIYQWQVPHHHALDENPSVLVVGRCGSSLSAPAVLSFIDAYTGMELNALSLFHTIAQVIPLPYTDSKEQRLHLIIDVDQKAHLYPRTPEAIEILQHGFSNVYWYSVEVDNGIIRGHALKSNCIGEVVDEYCFFFRDLWSVVFPSESEKIIATMTRKSNEVVHTQAKVMADQDVMYKYISSNLLFVANVAPKARGEIGTATPEEAWLVVYIIDTVTGRILHRMTHQGCQGPVHAVFSENWVVYHYFNLRAHRYEMSVVEVYDQSRADNKDVWKLILGKHNLTSPVTSYSRPEVIAKSQSYFFTHSVKAMEVTSTVKGITSQQLLIGTIGDQVLALDKRYLDPRRTLNPSQAEKEEGIIPLTDSLPIISQSYITHSLKVEGLRRIITVPAKLESTSLVFAYGVDLFFTRIAPSRTYDSLTEDFSYALLLITIVALVVAIFVTWVLSEKKELQDKWR 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0525 987 FunFam Os05g0230600 protein 32 340 - -
Lele01g0525 987 Pfam PQQ-like domain 52 132 IPR002372 -
Lele01g0525 987 SMART ire1_9 709 756 IPR018391 -
Lele01g0525 987 SMART ire1_9 142 172 IPR018391 -
Lele01g0525 987 SMART ire1_9 486 517 IPR018391 -
Lele01g0525 987 Gene3D - 31 347 IPR015943 GO:0005515
Lele01g0525 987 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 55 583 IPR011047 -
Lele01g0525 987 PANTHER UNCHARACTERIZED 2 987 IPR026895 GO:0072546
Lele01g0525 987 Pfam ER membrane protein complex subunit 1, C-terminal 769 986 IPR011678 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0525 Lele-ChrLele01 3117658 3125850 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0525 01 3117658 3125850 Lele03g0533 03 3141686 3152686 hybridization
Lele01g0525 01 3117658 3125850 Lele04g0534 04 3217684 3226349 hybridization