Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0459 ATGACGACCCTAAGATCGAGCTGGCCGTCGAGGCTGCGGCAACTTTTGTGCAGCGACGGTGCCATTGGCCCCTCCGTCAAACTGGACTCTGAACCGTTACTTTCTAGATATGATCATGCCCAATCTGAGGAACATAGTGGTGATAAGGATTCCCCAAACTTGAGAGTTATTCATATGCCAGATATGCATTTGCAGAAAGAAGACGATTTGTCCTTGTTGAAGCAGTGTATTGAGCAGTATAGTGTTTCTTCAGATCTCCGATTTTCTTTGCTCACCAGAATAAGATATGCTCGTTCCTTCCGGTCACCGAGAATATGCAGGTTTTATAGCAGGATTTGCCTTCTTGCATTTATTGTGCTTGTCCAGTCCAGTGATGCTCATGATGAACTTGTGTCCTTTTTTGCTAATGAACCAGAATATACAAATGAGTTAATTAGGGTTGTGAGATCTGAGAAAACTGTGTCTGGATCTATCAGAACATTAGCAATGCTTGCATTAGGAGCTCAATTAGCAGCATATACATCATCGCATGAACGGGCACGGATATTGAGTGGATCTAGTATAAGTTTTGCTGGTGGCAACCGCATGATACTTCTCAATGTGCTTCAAAGGGCTATTTTGTCGTTAAAAAGTTCTAACGATCCATCGTTCCTAGCCTTTGTGGAGGCACTTCTTCAGTTTTATCTGCTCCATGTGGTTTCAACCTCGACTTCTGGTAGTAATATTAGGGGTTCTGGCATGGTGCCCACATTCTTGCCTTTGTTGGAGGATTCTGATCCAGCGCACATTCATCTTGTCTCTTTTGCTGTGAAAACCCTTCAGAAGCTTATGGACTATAGTAGTTCAGCTGTATCCTTGTTTAAAGAGTTGGGGGGTGTTGAGCTTTTAGCTCAGAGGTTACAGATAGAGGTGCACAGAGTTATTGGTTTGGTTAGAGAAAATGATGACTTGATGATCACTGGTGAAAGCTCAAGACATGACACTGATCAGCTGTCCTCCCAAAAAAGGCTCATAAAGGTCTCGCTCAAGGCGCTGGGGTCTGCAACATATGCTGCTGCAAACTCTACCAGATCACGACATTCACATGACAGTTCTTTACCTGCAACACTAGTGTTGATTTTTGGGAATGTAGATAAGTTTGGAGGTGATATTTACTACTCAGCTGTTACTGTTATGAGTGAAATAATCCACAAAGATCCCACATGTTTTTCTGCTCTGCATGAAATGGGTCTTCCTGATGCATTTTTATCTTCAGTTGTATCTCGAGTATTTCCTTCTTCAAGGGCTTTGTCATGTATTCCTAATGGTCTTGGTGCTATTTGTCTCAATGCCAAGGGCCTGGAGGCTGTTAGAGAAACTTCAGCACTGCGGTTCCTTGTTGATATTTTCACAAGTAAAAAGTATGTCTTGGCAATGAATGAAGCTATTGTTCCTCTTGCAAATGCTGTGGAGGAACTTCTGCGTCATGTATCTTCATTGCGAAGTACTGGTGTTGATATCATTATTGAAATCATCCATAAGATTGTATCTTTTGGGGATGGTCTTGGTACGGGATCTTCAGGAAAAGATAATGAGGATACTGCAATGGAAACAGATTCTGTGGACAAAGAAAATGAAGGTCATTGCTGCCTTGTTAGTTCAACAGATTCAGCTGCAGAAGGGATGAGGGATGATCAATTCTTACAGCTGTGTATCTTTCATTTGATGGTATTAGTTCACAGGATGATGGAAAATTCTGAAACATGTCGGTTGTTTGTGGAAAAATTGGGAATTGAAGCTTTGCTGAAGTTGTTATTACGACCCACTATTGCACAATCCTCAGATGGCATGTCTATTGCTTTACATAGCACCATGGTCTTTAAGGGGTTTGCTCAGCATCACTCAGCTCCTCTAGCACATGCCTTTTGCTCCTCTCTTAGAGAGCACTTGAAGAAATCACTAGCAGGGTTTGATGCAGCTTCTGGACATTTATTGCTGGATCCAAGGATGACAAATGACAGCAGCATTTTTTCTTCACTTTTCTTGGTTGAGTTCCTTCTGTTTCTTGCTGCCTCAAAAGACAACCGTTGGGTGACTGCATTGCTGACAGAGTTTGGAGATGGCAGTAAAGATGTTCTGGTAGACATTGGGCAGGTCTATCGCGAGGTTCTGTGGCAAATTGCTCTTCTTGAAGATACAAAGCCTGATACTGAGGATAATGAGGCTTGCTCATCTGCTGATTCACATCAGGCAGAAGTGGATGCTAATGAAACTGAAGAGCAAAGGTTCAACTCTTTCAGGCAGTTTCTTGATCCATTACTGAGAAGGAGGACATCTGGATGGAGCATTGAATCTCAGTTTTTTGACCTTATAAACTTGTATCGAGATCTGGGCCGAGCCAGTGGTTCTCATAATATATCAAGTTCTGTTGGTCCTTCAAACATGAGGTTGGCTTCCAGTGATCATTTGCATCATTCTGGATCTTCTGATGCATCTGGGGCAAGTAGTAAGAAAGAAAATGAGAAGCAGAGGCCATATTATACCTCTTGTTGTGACATGGTCAGATCACTCTCATTTCACATCACCCATCTGTTTCAAGAGTTAGGAAAGGTAATGCTTCTACCTTCTCGTCGCCGTGATGATATGGTGAGTGTAAGTCCTGCAGCAAAATCATTGGCTTCAACTTTTGCATCCATTTCTCTAGATCACATGAATTTTGGTCGTGTTAGTACTTCAGTAGGAGAGGCATCCATATCAATAAAATGTCGTTACTATGGTAAAGTGATTGGTTTTATGGATAGCATTCTAATGGAGAAGCCAGATTCATGCAATCCTGTTTTATTGAATTGCTTGTATGGATGTGGTGTTGTTCAATCTGTATTGACTACATTTGAAGCAACAAGTCAGTTGCTCTTTGCAGTTAATCGGGCTCCAGCATCCCCTATGGATACTGATGATGGAAGTTTGAAGCAGGATGACAAAGAAGATGGTGATCATTCATGGATTTATGGTCCTTTAGCTAGTTATGGTAAATTTATTGACCATCTAGTGACCTCCTCTTTTATTTTATCTTCATTTACAAAGCACATGCTTGCACAGCCCCTTGCAAATTGTGATACTCCCTTCCCTCGAGATGCTGAGACTTTTGTGAAGGTCCTCCAATCCATGGTGTTGAAGGCTGTACTTCCAGTTTGGACTCATCCCCAGTTTGTTGATTGTAGCTATGAATTTATTTCTACTGTAATCTCTATTATTAAGCATGTTTATTCTGGGGTTCAAGTGAAAAATGTCAACAGCAGCAACAGTGCTCGTATCACAGGACCTCCTCCAAATGAAACGGCTATTTCAACCATTGTAGAGATGGGGTTTTCCAGGTCTCGAGCAGAGGAAGCTTTGAGGCAAGTTGGGTCAAATAGTGTTGAGTTGGCAATGGAGTGGTTGTTCTCCCATCCAGAGGATACTCAAGAAGATGATGAACTTGCCCGTGCACTTGCCATGTCCCTTGGGAGTTCAGACTCTGACACAAAAGATGCTGCTGAAAATGATAATGCTCAGCAGATTGAGGAAGAGATTGTTCAACTTCCACCAGTTGACGAGTTATTAGCTACTTGCACAAAACTTCTGCAGAAGGAATCCCTTGCTTTTCCTGTCCGAGACTTGTTTGTGATGATATGCTCTCAAGATGATGGTCAATATAGGCCTAATATAGTCTCTTTCCTTGCTGAACGGATCAAAGAATGTGGCTTGGTTCCTAGTAACGGAAATAATACCTTACTGGCTGCTCTTTTCCATGTTTTTGCTTTAATTTTGAATGAGGATGCTGTGGCACGAGAAACTGCATCCAAAATTGGTTTGATAAAAATTGCCTCAGATTTACTCTACCAGTGGCATTCAAGTTTTGATTGTAGGGCGAAACAGCAGGTGCCAAAATGGGTCATGGCAGCTTTTCTTGCATTAGACAGGCTGTTACAAGTGGATCAAAAACTGAACTCTGAAATTGTTGAGCAGATGAAGAAAGAAGCAGTGGATGGCCAGCCAGCATCAATTACCATTGACCAGGATAGGCAAAACAAATTGCAGTCTGCATTGGGACTGTCTAAGAAGTATGCAGACTTAAATGAGCAGAAGAGACTTGTTGAGATTGCCTGTAGTTGTATGAAGAACCAACTTCCATCAGACACAATGCATGCTGTTCTGTTACTATGTTCCAATCTTACAAGGAATCATTCTGTTGCCCTTAGCTTTCTTGATGCTGGGGGTTTAAGTTCACTTCTTTCTTTGCCAACCAGTAGCTTATTCCCAGGGTTTGACAATGTTGCTGCTAGTATCATACGTCAGGTCCTTGAAGATCCGCAAACTCTCCAACAAGCAATGGAATCTGAAATAAAACATTGTCTTGTGGCTGCTTCTAACCGGCATCCAATTGGAAGGATCAGTCCTCGCAATTTCCTGTCTAATTTAGCTTCTGTGATTTCTCGAGATCCTGTTATTTTCATGCAGGCTGCTCAATCTGTCTGCCAAGTTGAGATGGTAGGTGACAGGCCTTACATTGTATTGCTGAAAGATCGGGATAAAGACAAACCTAAGGAAAAAGAAAAGGAGAAGGATAGATCATTAGAGAAAGACAAAACACAAATTAATGATGGGAGGGTTGGTTTGGAAAATGCAAATGCAGCTTCTGGGAATAGCCATGGCAAGAGCCATGATTCAAATTCAAAGAGTGGCAGGAGTCATAGAAAACCTACCCAGAGTTTTATAAATGTGATGGAGCTTCTTCTTGAGTCCATATGTACCTTTGTACCGCCAGTGAAGGATAATGTGTCCTTAAATGCTGGACCTAGCACCCCAACATCAAGTGACATGGACATTGATGTCTCTGCAGTTAAGGGAAAAGGAAAAGCAGTTGCCACCATGTCTGAGGAGTATGAAACCAGCGTGCAGCAAACTTCTGCATCACTTGCAAAAATTGTATTTATTTTGAAGCTTCTTACAGAGATATTGTTGATGTATCCATCATCTGTACATGTTCTTCTTCGGCGAGATGCTGAAATGAGCAGAACTAAGTTCACTCTTCAAAAGAGTAGTCCAGCTGGTTTAAGCATGGGTGGGATTTTTTACCATATTCTCCATAATTTTCTTCCTTATTTTCGAGATGCAAATACTGATACTGGTGTTACATCTTCTGGGCTTGATAAATCAACTGATGCTGTTGATTACTCCAAATCCAAAACCTCCGGCCATCTTGAGGAATCTGAGGCTCAGAGAGTACTGAGTAGCCTACCGCAGGAAGAACTTCAGCTTTTATGCTCATTACTTGCACAAGAAGGGTATGACTTTGGGCTTATGCTTGTTGATTGCACTAATTCTGTTAACATTCTGGCCTACATTTTGTCGGATAATGCATATGCTCTCGTGGCGGAGGTAATGAAGAAATTAGTGGCCATTGCTCCAACTCATTGTCAGCTCTTTGTCACTGAGCTGGCTGGGGCAGTTCAAAACTTGACTTCATCTGCAATGGATGAATTACGTGTTTTTAGTGAAGCAATCAGATCTCTTCTTAGCACATCATCTTCTGATGGGGCTGCAATTTTGAGAGTTCTGCAAGCCTTAAGTTCCCTTGTTGCCTCACTGACTGAAAAGGAGAATGATAGAATTACTCCTGCTTTGTCTGAGGTATGGGAAATCAATTCAGCGTTAGAGCCTTTGTGGCATGAACTGAGCTGTTGCATAAGCAAGATGGAGTCATACTCAGAGTCTGCCTCTGATTTGTTCACCCCTTCTCGTACCAGTTTGTCTAAGCCATCAAATGCATTGTCTCCACTTCCACCAGGCTCTCAAAATATTTTACCATACATAGAATCTTTCTTTGTGGTTTGTGAGAATCTGCATCCTGCTCAGCCAGGTGCTAGTCATGATCTGGGCATTCCTGTTGTTTCTGATGTTGAAGATGCCAGAGCATCTGCTACTCAACAGAAAACGTCTGCACCTTCTGTGAAAGTGGATGAGAAAAATGCTGTTTTTGTCAAGTTCTCAGAGAAGCATAGGAAACTACTAAATGCTTTTATCAGGCAAAATCCTGGTTTGCTTGAGAAATCATTCTCCCTCATGCTGAAGGTTCCAAAATTTATTGATTTTGATAACAAGCGTGCCCACTTTCGGTCAAAGATAAAGCATCAGCATGACCATCATCACAGCCCATTAAGAATATCAGTTAGAAGGGCATATGTTTTGGAGGATTCTTATAACCAGCTTCGCATGAGATCTACTCGAGATTTGAAGGGAAGGTTGACTGTTCACTTCCAGGGGGAGGAAGGTATTGATGCAGGTGGTCTTACAAGGGAATGGTATCAATTATTGTCCAGAGTTATCTTTGACAAAGGAGCTCTTCTTTTTACAACAGTGGGCAACGAATCAACATTTCAGCCTAACCCTAACTCAGTTTACCAAACAGAACATCTTTCTTATTTCAAATTTGTTGGAAGAGTGGTTGGAAAAGCATTGTTTGATGGTCAGCTCTTGGATGTCCATTTTACTCGCTCATTCTACAAGCATATACTAGGGGTCAAAGTTACATATCACGATATTGAAGCCATTGATCCTGACTACTACAAAAATTTGAAATGGATGCTTGAGGCATGTGCATTTTTGTACTTCTTTCTTTCAACACAATTTCCATTGATTGCCATCTTGTTGGTTGTGGTGGTAAGTGATTATGAGTTGATTCCTGGTGGGCGGAATATCAAAGTTACTGAGGAGAATAAGCATCAATATGTCGATTTGGTTGCTGAGCACCGGCTGACCACTGCTATTCGACCTCAAATAAATGCCTTCTTGGAAGGATTCAATGAATTAATTCCAAGGGAGTTGATATCCATATTCCATGACAAAGAATTGGAATTATTGATCAGTGGACTTCCTGATATCGATTGCACATCCAAGGTGCCTCTGGAAGGTTTCAGTGCTCTTCAAGGAATCTCAGGTTCTCAGAAGTTTCAGATACATAAAGCATATGGGAGCCCTGATCATTTGCCTTCTGCTCATACTTGTCGTTTATTGCAATGGGAAAAATGCCTTTTGCAGTTTTTCGGTCAGCCTCTTTGCATCCATTACATATCTCGTTTGTTACTTCTGCAACTGCGATTTTGGTTGAACACCGATGGTTCTGTACATAAAGAAAATGCTAGTGTTGGTGGGCTACTACGTGATCACAAGGGCAAACCATTCTGCGCCTTTTGCAGTTAG 7221 0.4171 MTTLRSSWPSRLRQLLCSDGAIGPSVKLDSEPLLSRYDHAQSEEHSGDKDSPNLRVIHMPDMHLQKEDDLSLLKQCIEQYSVSSDLRFSLLTRIRYARSFRSPRICRFYSRICLLAFIVLVQSSDAHDELVSFFANEPEYTNELIRVVRSEKTVSGSIRTLAMLALGAQLAAYTSSHERARILSGSSISFAGGNRMILLNVLQRAILSLKSSNDPSFLAFVEALLQFYLLHVVSTSTSGSNIRGSGMVPTFLPLLEDSDPAHIHLVSFAVKTLQKLMDYSSSAVSLFKELGGVELLAQRLQIEVHRVIGLVRENDDLMITGESSRHDTDQLSSQKRLIKVSLKALGSATYAAANSTRSRHSHDSSLPATLVLIFGNVDKFGGDIYYSAVTVMSEIIHKDPTCFSALHEMGLPDAFLSSVVSRVFPSSRALSCIPNGLGAICLNAKGLEAVRETSALRFLVDIFTSKKYVLAMNEAIVPLANAVEELLRHVSSLRSTGVDIIIEIIHKIVSFGDGLGTGSSGKDNEDTAMETDSVDKENEGHCCLVSSTDSAAEGMRDDQFLQLCIFHLMVLVHRMMENSETCRLFVEKLGIEALLKLLLRPTIAQSSDGMSIALHSTMVFKGFAQHHSAPLAHAFCSSLREHLKKSLAGFDAASGHLLLDPRMTNDSSIFSSLFLVEFLLFLAASKDNRWVTALLTEFGDGSKDVLVDIGQVYREVLWQIALLEDTKPDTEDNEACSSADSHQAEVDANETEEQRFNSFRQFLDPLLRRRTSGWSIESQFFDLINLYRDLGRASGSHNISSSVGPSNMRLASSDHLHHSGSSDASGASSKKENEKQRPYYTSCCDMVRSLSFHITHLFQELGKVMLLPSRRRDDMVSVSPAAKSLASTFASISLDHMNFGRVSTSVGEASISIKCRYYGKVIGFMDSILMEKPDSCNPVLLNCLYGCGVVQSVLTTFEATSQLLFAVNRAPASPMDTDDGSLKQDDKEDGDHSWIYGPLASYGKFIDHLVTSSFILSSFTKHMLAQPLANCDTPFPRDAETFVKVLQSMVLKAVLPVWTHPQFVDCSYEFISTVISIIKHVYSGVQVKNVNSSNSARITGPPPNETAISTIVEMGFSRSRAEEALRQVGSNSVELAMEWLFSHPEDTQEDDELARALAMSLGSSDSDTKDAAENDNAQQIEEEIVQLPPVDELLATCTKLLQKESLAFPVRDLFVMICSQDDGQYRPNIVSFLAERIKECGLVPSNGNNTLLAALFHVFALILNEDAVARETASKIGLIKIASDLLYQWHSSFDCRAKQQVPKWVMAAFLALDRLLQVDQKLNSEIVEQMKKEAVDGQPASITIDQDRQNKLQSALGLSKKYADLNEQKRLVEIACSCMKNQLPSDTMHAVLLLCSNLTRNHSVALSFLDAGGLSSLLSLPTSSLFPGFDNVAASIIRQVLEDPQTLQQAMESEIKHCLVAASNRHPIGRISPRNFLSNLASVISRDPVIFMQAAQSVCQVEMVGDRPYIVLLKDRDKDKPKEKEKEKDRSLEKDKTQINDGRVGLENANAASGNSHGKSHDSNSKSGRSHRKPTQSFINVMELLLESICTFVPPVKDNVSLNAGPSTPTSSDMDIDVSAVKGKGKAVATMSEEYETSVQQTSASLAKIVFILKLLTEILLMYPSSVHVLLRRDAEMSRTKFTLQKSSPAGLSMGGIFYHILHNFLPYFRDANTDTGVTSSGLDKSTDAVDYSKSKTSGHLEESEAQRVLSSLPQEELQLLCSLLAQEGYDFGLMLVDCTNSVNILAYILSDNAYALVAEVMKKLVAIAPTHCQLFVTELAGAVQNLTSSAMDELRVFSEAIRSLLSTSSSDGAAILRVLQALSSLVASLTEKENDRITPALSEVWEINSALEPLWHELSCCISKMESYSESASDLFTPSRTSLSKPSNALSPLPPGSQNILPYIESFFVVCENLHPAQPGASHDLGIPVVSDVEDARASATQQKTSAPSVKVDEKNAVFVKFSEKHRKLLNAFIRQNPGLLEKSFSLMLKVPKFIDFDNKRAHFRSKIKHQHDHHHSPLRISVRRAYVLEDSYNQLRMRSTRDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVTYHDIEAIDPDYYKNLKWMLEACAFLYFFLSTQFPLIAILLVVVVSDYELIPGGRNIKVTEENKHQYVDLVAEHRLTTAIRPQINAFLEGFNELIPRELISIFHDKELELLISGLPDIDCTSKVPLEGFSALQGISGSQKFQIHKAYGSPDHLPSAHTCRLLQWEKCLLQFFGQPLCIHYISRLLLLQLRFWLNTDGSVHKENASVGGLLRDHKGKPFCAFCS 2406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0459 2406 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 1148 1167 IPR003903 -
Lele01g0459 2406 SUPERFAMILY ARM repeat 142 598 IPR016024 -
Lele01g0459 2406 SMART hect_3 2079 2358 IPR000569 GO:0004842
Lele01g0459 2406 ProSiteProfiles HECT domain profile. 2304 2342 IPR000569 GO:0004842
Lele01g0459 2406 SMART uba_6 1104 1142 IPR015940 -
Lele01g0459 2406 SUPERFAMILY Hect, E3 ligase catalytic domain 2051 2343 IPR035983 GO:0004842
Lele01g0459 2406 Pfam HECT-domain (ubiquitin-transferase) 2111 2302 IPR000569 GO:0004842
Lele01g0459 2406 Gene3D - 116 629 IPR011989 -
Lele01g0459 2406 PANTHER HECT DOMAIN UBIQUITIN-PROTEIN LIGASE 53 2302 - -
Lele01g0459 2406 CDD UBA_atUPL1_2_like 1107 1143 - -
Lele01g0459 2406 ProSiteProfiles HECT domain profile. 2081 2302 IPR000569 GO:0004842
Lele01g0459 2406 Pfam Domain of Unknown Function (DUF913) 269 601 IPR010314 -
Lele01g0459 2406 MobiDBLite consensus disorder prediction 1515 1574 - -
Lele01g0459 2406 Gene3D Hect, E3 ligase catalytic domain 2182 2262 - -
Lele01g0459 2406 MobiDBLite consensus disorder prediction 797 834 - -
Lele01g0459 2406 FunFam E3 ubiquitin-protein ligase UPL1 1101 1173 - -
Lele01g0459 2406 Pfam Domain of Unknown Function (DUF908) 41 206 IPR010309 -
Lele01g0459 2406 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 1102 1143 IPR015940 -
Lele01g0459 2406 CDD HECTc 2060 2342 IPR000569 GO:0004842
Lele01g0459 2406 FunFam E3 ubiquitin-protein ligase HACE1 2263 2297 - -
Lele01g0459 2406 SUPERFAMILY UBA-like 1087 1153 IPR009060 GO:0005515
Lele01g0459 2406 Pfam UBA/TS-N domain 1103 1140 IPR015940 -
Lele01g0459 2406 Gene3D Hect, E3 ligase catalytic domains 2033 2295 - -
Lele01g0459 2406 FunFam E3 ubiquitin-protein ligase NEDD4-like 2182 2262 - -
Lele01g0459 2406 Gene3D - 1101 1174 - -
Lele01g0459 2406 FunFam E3 ubiquitin-protein ligase UPL1 2035 2191 - -
Lele01g0459 2406 MobiDBLite consensus disorder prediction 1515 1541 - -
Lele01g0459 2406 Gene3D Hect, E3 ligase catalytic domain 2301 2366 - -
Lele01g0459 2406 SUPERFAMILY ARM repeat 1118 1885 IPR016024 -
Lele01g0459 2406 MobiDBLite consensus disorder prediction 797 827 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0459 Lele-ChrLele01 2691313 2706592 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0459 01 2691313 2706592 Lele01g0459 01 2691313 2706592 ECH
Lele01g0459 01 2691313 2706592 Lele02g0449 02 2642578 2655418 ECH
Lele01g0459 01 2691313 2706592 Lele03g0472 03 2697510 2712452 hybridization
Lele01g0459 01 2691313 2706592 Lele04g0465 04 2769019 2783950 hybridization