Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0382 ATGAAGGCAGAGACGGTGACTTTGGTGCTGGTGAACCTTGCTGGGATCATGGAGAGGGCTGACGAGTCATTGCTGCCGGGCGTCTACAAGGAAGTGGGTGCAGCGCTTCACACCGACCCAACCGGACTGGGCTCCCTCACCCTATTCCGGTCCTTTGTACAGTCCTTTTGCTATCCCTTAGCCGCCTACCTTGCGGTGCGACACAATCGGGCACACGTCATCGCTCTCGGTGCTTTTCTATGGGCCGCTGCTACTTTCCTCGTCGCCTTCTCCTCCACTTTCTTCCAGGTTGCTCTATCACGAGCATTAAATGGGATTGGCCTTGCACTGGTTGCACCTGCAATACAATCCCTTGTTGCTGACTCAACTGATGATTGCAATCGTGGCATGGCTTTTGGATGGCTTCAACTCACAAGCAATCTTGGTTCTATTGTTGGTGGCCTCTTCTCCGTGTTGATAGCTCCTATTACATTCATGGGTATCCCTGGTTGGAGAGTTTCATTTCATATTGTTGGACTAATAAGTGTTATAGTGGGTACTTTAGTATACTTCTTTGCCAAAGATCCACATTTCTCAGGATGTAGTACAAGTGCTAGCAACCGAATTCCAAATAGAACATTATGGTCAGAAGTAAAAGAGTTAGCTCAAGAAGTCAAGTCAGTTCTGAAGATTTTGTCATTCCAGATAATTGTTGCACAGGGCGTCACTGGCTCCTTCCCCTGGTCAGCATTGTCATTCGCACCCATGTGGCTTGAGCTCACTGGCTTCTCCCACAACAAAACAGCATTCCTCATAGCTTTGTTTGTGATTGGCAATTCTCTTGGAGGTTTATTTGGGGGTAAGGTTGGGGATATCCTTTCTACTCGATTTCCAAATTCTGGGAGAATAATTCTGGCACAGATAAGCTCTGCATCAGCAATCCCCCTTACAGCAATACTATTGTTGGGTTTATCGCATGATCCATCAACAGCAGTGTCACATGGGTTGCTTCTCATCATTGTAGGATTCTTCATCTCTTGGAATGCTCCTGCTGCCAACAATCCAATTTTTGCAGAGATTGTTCCTGAGAGAGCTCGAACAAGTGTATATGCGTTGGACCGGTCTTTTGAGTCACTGCTGTCATCTTTTGCTCCACCTTCAGTTGGACTTTTGGCTCAGCATGTGTATGGATATAAACCAATTCCCGGAGGGTCTACCGTATCTGAAGAGATTTCGATGGATAGAAAGAATGCTGCATCATTGGCTAAGGCACTGTATACTGCCATAGGCATTCCAATGGCAATCTGCTGTTTGATCTACTCATTCCTTTATGGAGCCTATCCAAGGGACAGGGAGAGAGCTCGGATGGTAGGTTTAATTGAATCAGAGATGCAGGAGATGGAGTCAGTTGGTTTAGGCAATAGTATAGATTTCCTCTCAAAAGCTCACTCTTCTGAGTCTGAAGAAATGTATGTTCATGATTATGATGGGGATGCCATCGATGTTGATGATGAAGATAATGTTCTGCTGCTTGGGCCTCCCCATACTGAAGGCAAATCACTCATCTGCATTATTCCTTCCGTTTCCTACACTGCGAATCCGATTGCTGTTCTCTTCACAGCTTTTCCTACTTTTCGCCCGTGTTTGACGATAACAATGGAGAGGACCACTCCGGTGAGGAACCCTCACACTTCCACCGCAGATCTGCTCACTTGGTCAGAAACTCCACCTCCCGATTCTCCGGTTCCCGGTTCCCCCGCTTCCCGCTCCGCTGCTCGTTCTCACCAGCCGTCGGATGGGATCAGTAAGGTGGTGTTTGGAGGTCAGGTGACGGACGAAGAGGTCGAGAGCTTAAATAAACGGAAACCTTGTTCCCAGTACAAAATGAAGGAGATAACAGGTAGTGGAATCTTCGCAGCCAACGGGGAAGATGACGCATCTGAATCTGGCAGTGCCAATCCTCCTCCAAATAAAACAGGGGTGCGCATGTACCAGCAAGCAATTGCTGGAATAAGTCATATCTCCTTTAGCGAGGAGGAGAGTATTTCTCCAAAAAAGCCCGTTACTTTGCCTGAGGTGGCCAAGCAGCGTGAGCTAAGTGGAACTCTGGAAAGTGAAGACGCAAAGTTGAAGAAGCAGCTTTCTGATTCAAAGTTCAAAGAGCTCACTGGTCAAGACATATTTGCTCCCCCCCCAGAAATTAAACCCCGACCAGGTGAGGGAGATGAGGGCAAGACCATGTCTAGTGACGAACCGATGAAGACAGCAAAAAAGATTTATAACCAGAAATTTGCGGAGCTTTCAGGGAATGACATCTTCAAGGGGGATGTAGCGCCACCGTCAGCGGAGAAATCGTTGAGTGTTGCTAAACAGAGGGAGATGAGTGGGAGTAACATTTTTGCTGATGGGAAGGTAGAATCAAGAGACTACCTAGGAGGCGTGCGGAAGCCACCTGGCGGAGAGAGCAGCATTGCATTGGTATAA 2463 0.4758 MKAETVTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSFVQSFCYPLAAYLAVRHNRAHVIALGAFLWAAATFLVAFSSTFFQVALSRALNGIGLALVAPAIQSLVADSTDDCNRGMAFGWLQLTSNLGSIVGGLFSVLIAPITFMGIPGWRVSFHIVGLISVIVGTLVYFFAKDPHFSGCSTSASNRIPNRTLWSEVKELAQEVKSVLKILSFQIIVAQGVTGSFPWSALSFAPMWLELTGFSHNKTAFLIALFVIGNSLGGLFGGKVGDILSTRFPNSGRIILAQISSASAIPLTAILLLGLSHDPSTAVSHGLLLIIVGFFISWNAPAANNPIFAEIVPERARTSVYALDRSFESLLSSFAPPSVGLLAQHVYGYKPIPGGSTVSEEISMDRKNAASLAKALYTAIGIPMAICCLIYSFLYGAYPRDRERARMVGLIESEMQEMESVGLGNSIDFLSKAHSSESEEMYVHDYDGDAIDVDDEDNVLLLGPPHTEGKSLICIIPSVSYTANPIAVLFTAFPTFRPCLTITMERTTPVRNPHTSTADLLTWSETPPPDSPVPGSPASRSAARSHQPSDGISKVVFGGQVTDEEVESLNKRKPCSQYKMKEITGSGIFAANGEDDASESGSANPPPNKTGVRMYQQAIAGISHISFSEEESISPKKPVTLPEVAKQRELSGTLESEDAKLKKQLSDSKFKELTGQDIFAPPPEIKPRPGEGDEGKTMSSDEPMKTAKKIYNQKFAELSGNDIFKGDVAPPSAEKSLSVAKQREMSGSNIFADGKVESRDYLGGVRKPPGGESSIALV 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0382 820 MobiDBLite consensus disorder prediction 639 653 - -
Lele01g0382 820 MobiDBLite consensus disorder prediction 551 597 - -
Lele01g0382 820 Pfam Protein of unknown function (DUF4057) 735 818 IPR025131 -
Lele01g0382 820 Pfam Protein of unknown function (DUF4057) 548 732 IPR025131 -
Lele01g0382 820 FunFam Major facilitator superfamily protein 1 396 - -
Lele01g0382 820 Pfam Major Facilitator Superfamily 13 378 IPR011701 GO:0022857|GO:0055085
Lele01g0382 820 ProSiteProfiles Major facilitator superfamily (MFS) profile. 7 441 IPR020846 GO:0022857
Lele01g0382 820 MobiDBLite consensus disorder prediction 670 746 - -
Lele01g0382 820 SUPERFAMILY MFS general substrate transporter 7 444 IPR036259 -
Lele01g0382 820 Gene3D MFS general substrate transporter like domains 3 402 IPR036259 -
Lele01g0382 820 MobiDBLite consensus disorder prediction 551 566 - -
Lele01g0382 820 MobiDBLite consensus disorder prediction 729 745 - -
Lele01g0382 820 MobiDBLite consensus disorder prediction 692 712 - -
Lele01g0382 820 MobiDBLite consensus disorder prediction 632 653 - -
Lele01g0382 820 PANTHER SPINSTER 5 459 IPR044770 -
Lele01g0382 820 CDD MFS_spinster_like 8 433 IPR044770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0382 Lele-ChrLele01 2237508 2246653 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0382 01 2237508 2246653 Lele01g0382 01 2237508 2246653 ECH
Lele01g0382 01 2237508 2246653 Lele03g0393 03 2266822 2269481 hybridization
Lele01g0382 01 2237508 2246653 Lele04g0387 04 2313681 2316500 hybridization