Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0340 ATGCTTGAAGCACTCGTGCGCGATGAGCCCACTGACGTTCTTTCCAGCTCCAAGAAGGATAAATTAGAGGCCGATAAGATAGACAAGGAGAGCCAGAAGCCTTCCCCGCCGGTTATTGTGGTTGCCCGGAGTCGCTCCCAGGGAGGTACCCGAAGAGTCACCCCTACCGGTCTACCCATCCCCCCTGATTGCTCGACTTCCACAGTAGAGAAGCATTTACCCAACGGTGATTTTTACATGGGCGGCTTCTCCGGGCATGTTCCTCACGGATCGGGGAAATACCTATGGACCGACGGGTGCATGTATGAGGGGGAGTGGAAGAGAGGCAAAGCTTCTGGGAAAGGCAAATTTTCTTGGCCTTCCGGAGCAACATACGAGGGCGAATTTAAAGCGGGACGGATGGAAGGTTTCGGTACTTTCACTGGATCCGACGGCGACACATACCGCGGCACCTGGAGTGCTGATCGGAAACATGGGTATGGGCAGAAACGCTACGCCAACGGCGATTTATATGAAGGGCCGTGGAAACGGAACCTTCAGGATGGCCAGGGCCGTTATGTGTGGATGAATGGGAACGAATATGTAGGCGAGTGGAAGAACGGTGTAATCTCTGGAAGAGGTGTGCTTATTTGGGCGAATGGGAATCGATATGAAGGGCAATGGGAGAACGGGGTTCCCAAAGGACAGGGGATTTTCACTTGGCCTGATGGAAGCTGCTATATAGGCGACTGGAACAAGGATATGGAAATGCAGCAGTTGAATGGCACTTTCTACCCTGGTTCTGGAAAAGAGAACTATCTTATAAGCAATGGGCCATTAACGGGTGATAATTTGACAATAACGATGAGGAAGAGGTCGTCCGTGGACGGAGCTAGAAGGAGCATGACTGAGAAGAATTTTCCTAGAATTTGCATATGGGAATCAGACGGTGAAGCGGGTGATATAACTTGTGATATCATCGATAATGTGGAAGCATCCATGTTTTATAGGGATGGAAAGGGGTTAGAACGAGATGATTTAAAGCAGTTTCGGCGGAACTCTTGGTGTTTCTCCGGGGAGGTGAAAAGACCAGGGCAAACCATATTCAAGGGTCACAAGAATTATGATTTAATGCTTAATCTGCAATTGGGCATAAGACACTCTGCTGGGAAGGAAGCTTCAATATTGCGAGAGCTTAAACCAAGTGATTTTGATCCGAAGGAGAAGTTCTGGACCAGGTTTCCTCCGGAAGGATCCAAGAATACACCACCTCATCAATCAGCGGAGTTCCGGTGGAAAGATTACTGCCCAATGGTTTTTAGGCAATTGAGGAAGCTTTTTCGGGTGGATCCTGCTGATTACATGTTAGCTATATGCGGTGATGATGCCCTTAGGGAGCTTTCTTCTCCGGGGAAGAGTGGAAGTATCTTCTACATGACTCAGGACGACAGATTCATGATAAAGACAGTGAAGAAATGTGAAGTCAAGGTGCTTATTCGGATGCTTCGAAGTTATTACCAACATGTTTCTAAATATGAGAATTCACTCGTGACGAAGTTCTATGGGGTACACTGTGTCAAACCAATTGGAGGACAAAAGACACGGTTCATTGTGATGGGGAATCTTTTCTGCTCGGAATATCCAATCCATAGACGATTTGACTTGAAAGGATCTTCTCATGGCCGAATAACAGATAAGCCTGAGGAGGAGATTGACGAGACTACAACCTTGAAGGACCTTGATCTCAATTTTGTGTTTCGCCTACAGCAAAATTGGTACCAGGATTTCATCAAGCAAATTGAGAGAGATTGTGAGTTCTTGGAGTCTGAGGGCATAATGGATTACAGTCTTCTGGTTGGCCTTCACTTTCGTGATGATAATAATTATGACAAAATGGGTCTGTCGCCATTTGTCATGCGCACAGGAAATCGGGATTCTTATCAGATTGAAAAGTTCATGCGTGGATATCGCTTTCTTGAAGCTGAGCTTCAAGATAGGGATCGAGTTATATCTGGCCGGAAATCATTGATTAGGTTAGGAGCCAATATGCCGGCAAGAGCAGAGCGAATGACTCGGAGGAGTGATTTTGATCAATACACCATGGGTGGTATCAGTCATCTGACCCCTTATCGATGCGGAGAGACATATGATGTGGTCCTGTATTTTGGGATCATTGACATTCTGCAAGATTATGATATCAGCAAGAAGTTGGAGCGAGCTTACAAATCTTTGCAAGTGGACTCCACTTCCATCTCTGCGGTTGATCCAAAGCTGTATTCGAAGAGATTCCGTGATTTTGTGGGGAGAGTTTTCACAGAGGACGTGTAG 2307 0.4664 MLEALVRDEPTDVLSSSKKDKLEADKIDKESQKPSPPVIVVARSRSQGGTRRVTPTGLPIPPDCSTSTVEKHLPNGDFYMGGFSGHVPHGSGKYLWTDGCMYEGEWKRGKASGKGKFSWPSGATYEGEFKAGRMEGFGTFTGSDGDTYRGTWSADRKHGYGQKRYANGDLYEGPWKRNLQDGQGRYVWMNGNEYVGEWKNGVISGRGVLIWANGNRYEGQWENGVPKGQGIFTWPDGSCYIGDWNKDMEMQQLNGTFYPGSGKENYLISNGPLTGDNLTITMRKRSSVDGARRSMTEKNFPRICIWESDGEAGDITCDIIDNVEASMFYRDGKGLERDDLKQFRRNSWCFSGEVKRPGQTIFKGHKNYDLMLNLQLGIRHSAGKEASILRELKPSDFDPKEKFWTRFPPEGSKNTPPHQSAEFRWKDYCPMVFRQLRKLFRVDPADYMLAICGDDALRELSSPGKSGSIFYMTQDDRFMIKTVKKCEVKVLIRMLRSYYQHVSKYENSLVTKFYGVHCVKPIGGQKTRFIVMGNLFCSEYPIHRRFDLKGSSHGRITDKPEEEIDETTTLKDLDLNFVFRLQQNWYQDFIKQIERDCEFLESEGIMDYSLLVGLHFRDDNNYDKMGLSPFVMRTGNRDSYQIEKFMRGYRFLEAELQDRDRVISGRKSLIRLGANMPARAERMTRRSDFDQYTMGGISHLTPYRCGETYDVVLYFGIIDILQDYDISKKLERAYKSLQVDSTSISAVDPKLYSKRFRDFVGRVFTEDV 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0340 768 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 74 191 - -
Lele01g0340 768 PIRSF PIP5K_plant 268 768 IPR017163 GO:0005524|GO:0016308
Lele01g0340 768 PIRSF PIP5K_plant 59 273 IPR017163 GO:0005524|GO:0016308
Lele01g0340 768 MobiDBLite consensus disorder prediction 1 65 - -
Lele01g0340 768 Gene3D - 535 764 - -
Lele01g0340 768 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 366 764 IPR002498 GO:0016307|GO:0046488
Lele01g0340 768 Pfam MORN repeat 217 238 IPR003409 -
Lele01g0340 768 Pfam MORN repeat 79 101 IPR003409 -
Lele01g0340 768 Pfam MORN repeat 125 147 IPR003409 -
Lele01g0340 768 Pfam MORN repeat 171 192 IPR003409 -
Lele01g0340 768 Pfam MORN repeat 102 123 IPR003409 -
Lele01g0340 768 Pfam MORN repeat 148 169 IPR003409 -
Lele01g0340 768 Pfam MORN repeat 194 216 IPR003409 -
Lele01g0340 768 MobiDBLite consensus disorder prediction 1 32 - -
Lele01g0340 768 Gene3D - 200 266 - -
Lele01g0340 768 Gene3D - 68 131 - -
Lele01g0340 768 Gene3D - 132 199 - -
Lele01g0340 768 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 353 534 IPR027484 -
Lele01g0340 768 FunFam Phosphatidylinositol 4-phosphate 5-kinase 353 534 - -
Lele01g0340 768 FunFam Phosphatidylinositol 4-phosphate 5-kinase 201 271 - -
Lele01g0340 768 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 87 765 IPR023610 -
Lele01g0340 768 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 165 256 - -
Lele01g0340 768 FunFam Phosphatidylinositol 4-phosphate 5-kinase 154 200 - -
Lele01g0340 768 SMART morn 77 98 IPR003409 -
Lele01g0340 768 SMART morn 192 213 IPR003409 -
Lele01g0340 768 SMART morn 100 121 IPR003409 -
Lele01g0340 768 SMART morn 169 190 IPR003409 -
Lele01g0340 768 SMART morn 123 144 IPR003409 -
Lele01g0340 768 SMART morn 215 236 IPR003409 -
Lele01g0340 768 SMART morn 146 167 IPR003409 -
Lele01g0340 768 SUPERFAMILY SAICAR synthase-like 363 764 - -
Lele01g0340 768 CDD PIPKc_AtPIP5K_like 367 763 - -
Lele01g0340 768 SMART PIPK_2 393 765 IPR002498 GO:0016307|GO:0046488
Lele01g0340 768 FunFam Phosphatidylinositol 4-phosphate 5-kinase 109 153 - -
Lele01g0340 768 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 452 761 IPR002498 GO:0016307|GO:0046488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0340 Lele-ChrLele01 1980696 1984670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0340 19 767 Acyl Lipid Metabolism Gene Families AT1G77740 72.800 0.0 1114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0340 01 1980696 1984670 Lele01g0340 01 1980696 1984670 ECH
Lele01g0340 01 1980696 1984670 Lele03g0349 03 1973808 1977806 hybridization
Lele01g0340 01 1980696 1984670 Lele04g0345 04 2027736 2031617 hybridization