Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0228 ATGGAGTTCCCGGACATTACGACATGGAAATCACCACGAAGGGAACTGCAAGGCCCTCGTCCCGCGCCTCTGAGGATACACAAAGATTCCCACAAGATCAAGAAACCACCGCTGGCGCCGCAACCACAACCTCCTCCGCGCCAGCCTGTCATCATCTACACTGTCTCTCCCAAAGTAATCCACACCACGCCGGGCGACTTCATGAGTCTCGTTCAACGCCTAACTGGCACTTCTTCTTCGTCTTCTTCCTCCACTACGGGGTCAAACGATCCTTTCAACCGTAATAATAGCGATATGGTATCGCCGGCGGCGCGATTCGCCGCTATAGAGAAAGCTAGGTCTCCCCAGGTGAAGAAAGTACTGGTACAGCATCAGAGTGGGGAAGCTGGTGGTTACGGGGAAGGGATTGTGGAGATGGGCGCTGCGATTGAGAGGCCCAACAGTGCGTTTCCTGGGATTTTGTCGCCGGGACCGGCTGCACTGTCTCCAATTCCCGCAAGCTTCTTCTCGCCGCCGTCAACGGTGGATCCAGCCGTGGGTAGCTTCCTTCATGATTTGAGCCCAGCCCTTCACCGGAGTTTTATGGAGGGTAGTTTCGTGCCTAGCCCTTCATACTTTGTTTCACCTCTTACTCCTTCTATCGACTTATTCAATAATTTCTTTGATTCATGA 672 0.5327 MEFPDITTWKSPRRELQGPRPAPLRIHKDSHKIKKPPLAPQPQPPPRQPVIIYTVSPKVIHTTPGDFMSLVQRLTGTSSSSSSSTTGSNDPFNRNNSDMVSPAARFAAIEKARSPQVKKVLVQHQSGEAGGYGEGIVEMGAAIERPNSAFPGILSPGPAALSPIPASFFSPPSTVDPAVGSFLHDLSPALHRSFMEGSFVPSPSYFVSPLTPSIDLFNNFFDS 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0228 223 Pfam VQ motif 54 80 IPR008889 -
Lele01g0228 223 PANTHER F16F4.1 PROTEIN-RELATED 11 192 IPR039607 -
Lele01g0228 223 MobiDBLite consensus disorder prediction 1 49 - -
Lele01g0228 223 MobiDBLite consensus disorder prediction 74 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0228 Lele-ChrLele01 1308256 1308927 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0228 01 1308256 1308927 Lele01g0228 01 1308256 1308927 ECH
Lele01g0228 01 1308256 1308927 Lele03g0234 03 1279076 1279747 hybridization
Lele01g0228 01 1308256 1308927 Lele04g0229 04 1363895 1364435 hybridization