Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02509 ATGGCAGTGTCTCCTTGCATTCATTGCAGAGCAGGCATGTCGATCCTCTCCATTCCCTCGCCATTCTGTGCTTCCTCTCATTCCTCCCTCTCTATTTCTCGCCTGCCCTCTTCTTTCACGGCTCAGCCTCTGCAACTGAGAACAAGGCCAAAAGGGAAAGCTCTGGTGGTTATGAGTATGGAAGCAGGTATTGGAGTCATGGCCACCAAATTGGGTATGATGAGCTTCTTCCAACCCGACGGTGTCGTTGTTCCCGTCACTGTCGTTGGCTTCAAAGAAGGCAACATCGTCACTCAGATCAAAACTGAGGCCACCGATGGCTACAATGCCGTCCAGGTTGGTTACCGAAGGGTCAGAGACCGCAAACTGACCAAACCCGAAATGGGTCATCTCCAGAAGGTTGGTGCCATTCCCATGCGTCATCTTCAGGAGTTCCGTCTTCAAACCGTTGACCAATTCGACCTTAACCAGCGCCTCGTTTTGGATGAACTTTTCAAGGAGGGCGATCTCGTTGATGTCTCTGGCACCACCATCGGCAAGGGTTTCCAAGGTGGAATCAAGCGTCATAACTTCAAAAGGGGTCCAATGACCCATGGTTCGAAGAGCCATAGACAACTGGGATCAATCGGTGCTGGAACCACACCTGGTCGTGTGTACAAGGGAAAGAAGATGCCCGGAAGGATGGGAGGAACGAAGACGAAGATAAGAAAGCTTAAGATTGTAAAAATCGACAATGATCTTAACGTGGTAATGATCAAAGGTGCTGTCCCTGGTAAGCCTGGAAATCTTCTCCGGATAACTCCAGCCAAGATTGTGGGCAAGAACATTCCAAACAATTAG 840 0.4976 MAVSPCIHCRAGMSILSIPSPFCASSHSSLSISRLPSSFTAQPLQLRTRPKGKALVVMSMEAGIGVMATKLGMMSFFQPDGVVVPVTVVGFKEGNIVTQIKTEATDGYNAVQVGYRRVRDRKLTKPEMGHLQKVGAIPMRHLQEFRLQTVDQFDLNQRLVLDELFKEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKIDNDLNVVMIKGAVPGKPGNLLRITPAKIVGKNIPNN* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02509 279 SUPERFAMILY Translation proteins 64 275 IPR009000 -
Lapu9g02509 279 Hamap 50S ribosomal protein L3 [rplC]. 63 270 IPR019927 GO:0003735|GO:0005840|GO:0006412
Lapu9g02509 279 MobiDBLite consensus disorder prediction 184 230 - -
Lapu9g02509 279 NCBIfam 50S ribosomal protein L3 65 266 IPR019927 GO:0003735|GO:0005840|GO:0006412
Lapu9g02509 279 FunFam 50S ribosomal protein L3 95 159 - -
Lapu9g02509 279 Gene3D Translation factors 191 271 - -
Lapu9g02509 279 Pfam Ribosomal protein L3 157 245 IPR000597 GO:0003735|GO:0005840|GO:0006412
Lapu9g02509 279 ProSitePatterns Ribosomal protein L3 signature. 165 188 IPR019926 -
Lapu9g02509 279 PANTHER 50S RIBOSOMAL PROTEIN L3 53 271 IPR019927 GO:0003735|GO:0005840|GO:0006412
Lapu9g02509 279 FunFam 50S ribosomal protein L3, chloroplastic 191 271 - -
Lapu9g02509 279 Gene3D - 96 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02509 Lapu-Chr9 39360114 39362081 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02509 K02906 - gmx:100802392 442.965