Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02508 ATGACGATCCATTCGATAGTGATACAGAAGCTGCTGAGCACGAATGCGCAGGTGGGTCGAAGAGTTGCTGCTCACCATTTCAAGGACTACACCTATGGCTTCCGCAACAAGATGGCCATCATCGACTCCGACAAAACCCTCATTTGCATGCGCAGCGCCTTCAACTTCATCGCCTCCCTCGCCCGCCACAACGCCCGCTTCATGTTCATCAACACCAACCCTCTCTTCGACGACATCTTCAACCTCATGACCAAAAAGGTTGGCTCCTACTCCTCCTCCACCAGCTCCCTCTGGCGCACCGGCGGCTTCCTCACCAACAGCTACAGCCCCAAGAAGTTCCGCTCCCGCAACAAGAAGCTCGTCTTCGGCCCCACCCAGCCTCCCGATTGCATCGTCATTGTCGACACCGATCGAAAGTCTTCCGTCATCAACGAGGCTTTCAAGCTTCAAATTCCCGTTGTTGCATTGGTCGACTCCGCCATGCCCCTCGATGTCTACAACCGCATTGCCTATCCTATTCCCGCCAACGATTCTGTTCAATTCGTTTATTTGTTCTGTAATTTGATTACCAAAACACTGCTTCATGAGAAGAGCAAGTCTGCTGCTGCTGCTGATCTCAAAATTGATTCTCGAGAAGAAGCTCAGCGCAAGGGCAAGAGCGATTTGGATAAGGTCGGCATAACCGTAGTTCCCTATGGTAGTTTAGCTCCCTTACCCGAAGATACAGAGGAAACTAAGAAGCTTTTGGACAAGCTTGTTGTTTTGAAGTTCAATGGTGCCCAAGGAAGAAATCTGGATTTTGATGGTCCCAAATCTACAATTAATATTAGTGATGGACAGACATTTCTGGATTTGATCATTAACCAGATTGAGATGCTCAACTCCAAGTATGGATGCAGGGTTCCATTGCTTCTTTTCAACAAAAATAACATTCATGATAGTTCTCTAAAGGTTCTGGAGAAGTATTCAAAATCAAGTGTTGAAGTGCACGCACTGAAGCAGGGTGAAGGTGGAGAATTGAAATTATCGGGTGAACATTCCAGTAAGGAGGAAGTGCATCCATTTGATGATGTTGATGTGTTTCATTCACTCGTGACTGGTGGAACCCTTGATTCATTGTTGTCACAGGGTAAAGAGTATATCCTAGTGTTGAAGTCGGATAATGTGGCAACAATTGTTGATCCAAACATACTAAATCATTTGATGATAAATGATATTGAATATTGCATGGAGGTGACACCAAGCCAATCGTCTAACCTAATCTTAACTGCAATGAAATTTAAGCTTCGGGAGATTGCTCGCAACCAAGATAAAAATTTGAGGGACAATTTCAAACTCATTGATACAACAAACATGTGGGTGAGTTTAAGAGCCATCAAGAGATTTGTTGATACTGATGAACTAAAGAAGAAGAAGCCCTTAGTGTTGAAGGATACAACAACCAGATCGACTATACAGTTCTTTGATAATGCAATTGGTGTCTCTGTGCCTGAATCTCGCTTTCTTCCATTGGATGCAACATCAGATCTATTGCTTCTTCAGTCAGATCTATACACTTGTAGAGAAGGTGTTTTAACTCGCAATCCAGCTAGAACTAACCATTTAAATCCTGTGATAGACTTGGGACCTGAATTTGAAAAGGTTGGTGACTTCCAAAGTCGTTTCAAATCCATTCCAAGCATCATTGAGCTGGATAGTTTGAGGGTGAGAGGTGATGTGTGGTTTGGAGCTAATATTACTCTGAAGGGCCAAGTGACAATTGCTGCAAAACCTGACTTGAAATTGGAAATTCCAGATGGGGTGACGATTGAGAATAAGGAGATCAACGACCCTGCAGATATCTGA 1845 0.4412 MTIHSIVIQKLLSTNAQVGRRVAAHHFKDYTYGFRNKMAIIDSDKTLICMRSAFNFIASLARHNARFMFINTNPLFDDIFNLMTKKVGSYSSSTSSLWRTGGFLTNSYSPKKFRSRNKKLVFGPTQPPDCIVIVDTDRKSSVINEAFKLQIPVVALVDSAMPLDVYNRIAYPIPANDSVQFVYLFCNLITKTLLHEKSKSAAAADLKIDSREEAQRKGKSDLDKVGITVVPYGSLAPLPEDTEETKKLLDKLVVLKFNGAQGRNLDFDGPKSTINISDGQTFLDLIINQIEMLNSKYGCRVPLLLFNKNNIHDSSLKVLEKYSKSSVEVHALKQGEGGELKLSGEHSSKEEVHPFDDVDVFHSLVTGGTLDSLLSQGKEYILVLKSDNVATIVDPNILNHLMINDIEYCMEVTPSQSSNLILTAMKFKLREIARNQDKNLRDNFKLIDTTNMWVSLRAIKRFVDTDELKKKKPLVLKDTTTRSTIQFFDNAIGVSVPESRFLPLDATSDLLLLQSDLYTCREGVLTRNPARTNHLNPVIDLGPEFEKVGDFQSRFKSIPSIIELDSLRVRGDVWFGANITLKGQVTIAAKPDLKLEIPDGVTIENKEINDPADI* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02508 614 Pfam UTP--glucose-1-phosphate uridylyltransferase 229 582 IPR002618 GO:0070569
Lapu9g02508 614 SUPERFAMILY Nucleotide-diphospho-sugar transferases 240 591 IPR029044 -
Lapu9g02508 614 CDD RPS2 11 194 IPR001865 GO:0003735|GO:0005840|GO:0006412
Lapu9g02508 614 PRINTS Ribosomal protein S2 signature 145 156 IPR001865 GO:0003735|GO:0005840|GO:0006412
Lapu9g02508 614 PRINTS Ribosomal protein S2 signature 8 26 IPR001865 GO:0003735|GO:0005840|GO:0006412
Lapu9g02508 614 PRINTS Ribosomal protein S2 signature 169 183 IPR001865 GO:0003735|GO:0005840|GO:0006412
Lapu9g02508 614 PRINTS Ribosomal protein S2 signature 128 145 IPR001865 GO:0003735|GO:0005840|GO:0006412
Lapu9g02508 614 SUPERFAMILY Ribosomal protein S2 8 204 IPR023591 -
Lapu9g02508 614 Pfam Ribosomal protein S2 125 193 IPR001865 GO:0003735|GO:0005840|GO:0006412
Lapu9g02508 614 Pfam Ribosomal protein S2 11 108 IPR001865 GO:0003735|GO:0005840|GO:0006412
Lapu9g02508 614 Gene3D Hexapeptide repeat proteins 505 614 - -
Lapu9g02508 614 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 194 504 IPR029044 -
Lapu9g02508 614 FunFam UTP--glucose-1-phosphate uridylyltransferase 505 614 - -
Lapu9g02508 614 Gene3D - 2 193 - -
Lapu9g02508 614 PANTHER - 66 614 IPR016267 GO:0003983|GO:0006011
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02508 Lapu-Chr9 39347429 39359981 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02508 K00963 - gmx:100812583 989.178