Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02481 ATGCAAGATATCCCCTTCTATGTCCTTATATTTTTCTTTCTTCTATTACCAACTTCTCTGGTTTCTCCTTTATATGATGGGCCCCTGTATGACTCCACTGCCTACACTGAGTGCAAAGAGAAGCCAGGGGAGCCACTTTATGGAGGAGGACTTCTCAAGAAGAGTGACCAACAGTCTCTTCCTGCTGTTCAAGACAACATTGCCTCATCTTACGTTGTCAACAACAGCTACGTGCCTTCACTCCTTCTCTATAATCTCACTCAGGGAACCATTTACACTTTTTCCGCATGGGTGAGAGTTAAAGATTCAAGTTCAGCAATGATAAGGGCTACCCTGGAGACAGAGAAAGAAACGTATGATTGCATAGGAACAGTTTCGGCCAAGCTTGGATGCTGGTCATTTCTGAAGGGTGGTTTCGTTCTCAATTGGCCTTCAAATTTATCCATTATCTTCTTCCAGAACGCGGATGGTAAAGACATCAATATAGAAGTTGCTAGCCCATCACTCCAGCCATTTACTAAGCAACAATGGAGAATCAATCAACAGTATATAATCAATACTAAAAGAAAGCGTGCCGTCACTATTCATGTGTCAGATAGTAACGGAAGAAGATTGCAAGGAGCTTCCATCTGTATAGAGCAAATCTCAAAAGACTTCCCATTTGGATCTGCAATAGCAAAGACTATTCTTGGCAACTTACCCTATCAGAATTGGTTTGTGAAACGATTCAATGCTGCAGTCTTTGAAAATGAGCTCAAATGGTACGCCACAGAACCTGATGAAGGCAAGGTCAATTACACCATTTCAGACCAAATGCTACAGTTTGTTAGAACAAACAATATCGTAGCCAGAGGGCACAACATATTTTGGGAAGACCCTAAATACACTCCTCCATGGGTTCTTAACCTTACTGCCATCCAGTTACAATCTGCTGTGAATTCCCGAATACACAGTCTCATGAGCCAATACAAAGATGAGTTCATACACTGGGACGTCAGCAATGAAATGCTTCATTTTGATTTCTACGAGCAAAGGCTTGGATCTGATGCCACATTACATTTTTTTGAGACTGCACATAAATCAGATCCATTGTCAACCCTGTTTATGAATGACTTCAATGTTGTGGAAACATGCAGTGATGTAAATTCCACTGTAGACGCCTATATCTCAAGGGTAAGAGAACTGCAACGAAATGGAATCTTTATGGATGGAATTGGCTTGGAGGGGCACTTCACAATACCCAATCCTCCCCTTATCAGAGCCATCCTAGACAAGTTGGCAACACTTGGACTTCCCATTTGGCTTACTGAGGTTGATATAAGCAAGACAATTGATAGAGACTCACAGGGAAATTATTTGGAGGAAGTGTTGAGGGAAGGGTTCTCACATCCTTCTGTGAATGGGATAATGCTTTGGACGGCATATCATCCAAATGGGTGCTACCAAATGTGCCTCACAGACAACAATTTCAAGAACCTGCCAGCAGGTGATACGGTGGACAAACTTCTTGAAGAGTGGCAAACAGGTCGTGTAGAGGGAGTGGCAGATGTGCACGGTTCCTATAGCTTTTTTGGCTTCTTAGGAGAATATACTGTTACTGTCAACTATGGCAACAGGACCACACATTCAACATTCTCCCTCTCTCCAGGTGAAGAAACTAGGCATTTCACCATTACACTCTGA 1683 0.4248 MQDIPFYVLIFFFLLLPTSLVSPLYDGPLYDSTAYTECKEKPGEPLYGGGLLKKSDQQSLPAVQDNIASSYVVNNSYVPSLLLYNLTQGTIYTFSAWVRVKDSSSAMIRATLETEKETYDCIGTVSAKLGCWSFLKGGFVLNWPSNLSIIFFQNADGKDINIEVASPSLQPFTKQQWRINQQYIINTKRKRAVTIHVSDSNGRRLQGASICIEQISKDFPFGSAIAKTILGNLPYQNWFVKRFNAAVFENELKWYATEPDEGKVNYTISDQMLQFVRTNNIVARGHNIFWEDPKYTPPWVLNLTAIQLQSAVNSRIHSLMSQYKDEFIHWDVSNEMLHFDFYEQRLGSDATLHFFETAHKSDPLSTLFMNDFNVVETCSDVNSTVDAYISRVRELQRNGIFMDGIGLEGHFTIPNPPLIRAILDKLATLGLPIWLTEVDISKTIDRDSQGNYLEEVLREGFSHPSVNGIMLWTAYHPNGCYQMCLTDNNFKNLPAGDTVDKLLEEWQTGRVEGVADVHGSYSFFGFLGEYTVTVNYGNRTTHSTFSLSPGEETRHFTITL* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02481 560 SUPERFAMILY Galactose-binding domain-like 85 162 IPR008979 -
Lapu9g02481 560 Gene3D Glycosidases 210 515 - -
Lapu9g02481 560 SMART glyco_10 252 503 IPR001000 GO:0004553|GO:0005975
Lapu9g02481 560 SUPERFAMILY (Trans)glycosidases 204 510 IPR017853 -
Lapu9g02481 560 Pfam Glycosyl hydrolase family 10 215 474 IPR001000 GO:0004553|GO:0005975
Lapu9g02481 560 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 206 502 IPR001000 GO:0004553|GO:0005975
Lapu9g02481 560 PANTHER GLYCOSYL HYDROLASE 78 552 IPR044846 GO:0004553|GO:0005975
Lapu9g02481 560 PRINTS Glycosyl hydrolase family 10 signature 327 338 IPR001000 GO:0004553|GO:0005975
Lapu9g02481 560 PRINTS Glycosyl hydrolase family 10 signature 398 410 IPR001000 GO:0004553|GO:0005975
Lapu9g02481 560 PRINTS Glycosyl hydrolase family 10 signature 283 295 IPR001000 GO:0004553|GO:0005975
Lapu9g02481 560 PRINTS Glycosyl hydrolase family 10 signature 365 376 IPR001000 GO:0004553|GO:0005975
Lapu9g02481 560 Gene3D - 63 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02481 Lapu-Chr9 39101099 39104194 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02481 26 560 Glycoside Hydrolase AT4G38650 64.193 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02481 - - vra:106762624 1050.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02481 9 39101099 39104194 Lapu9g02481 9 39101099 39104194 ECH