Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02463 ATGGAGAGTAAGTCAGGGAGTAGCAAGCGGAAAAATGGTGCTAAGGGAGAGATTGTGGATGGTTCCAAGATTATGGAATTGGTTGGAAACGAGCAAGTTTTCAGCAACTTTGTGGACAATAAGTTTGATGAGTTGGATAAGGACAGAGATGGGAAACTCTCCATTAAGGAGCTTGAACCTGCTGTTGCTGATATCGGTGCTGGCCTTGGTTTGCCTGCTCAAGGCACTAGTCCTGATTCAGATCACATCTACTTTGAGGTCTTGAATGAGTTCACCCATGGCAAGCAAGAAAAAGTAAGCAAAATCGAGTTCAAAGAGGTTCTCTCAGACATTCTTTTGGGCATGGCTGCTGGACTAAAGCGAGACCCTATTGTTATACTCCGCATGGAAGGCGAAGATCTCCTTGAGTTTGTTAATGGACCAAGTTATGAAGCAGAAATGGCATCCATTTTCTCTCAGATTGAGTCCCCTAGTGGATCACTTCGTGAACATGTAATTGAAGCTTTTGGGAGACTCACTGTTGATCAAGGAATTCCTCCCACATCAGATTCTTGGATATGTCTCAACGTTCTTTCATTTCCTTACCCTCCTGACTTACAATTTGGCATCAAGGTTTTCAACAACATTGTGGATCCAGCACTGTCTCAAGCTGGGCCTGCTTTGGACAAGCCTGCTTCTCAGGAGACATTTTTTGAAGAATTTAAGAAAGTAGCATTCAGTGTGGTTGATTTTCTTAAAGAGAAACCTGTCATTGTTGCCCACAGTGAAAACACATTTGATGGACGCGGCGTTAAGAGACTTTTATCCAACAAGTTTGAACTAGACAGGACGTTGAACTTGGCTTTAGAGAATCTGCCAAAAGATCGCAATGGAAAAATATCAAAGGACTATCTGCGGGTGGCACTAGATCTGGTGTCTCCATCTGCTGGTTTACCTCCAGTTGGTGCAATTGAAGAGATGGATAAAGTTATTGTTGAAGCCTTTAAGATGGTGAATACCGAAGACACAAACACAGTTGGAGAAGAAGAGTTCAAGAAAATTTTAACTGAAATATTAGGGGGCATCATGTTGCAGTTAGAGGGCAATCCCATATCTGTTTCTTCAAATTCAGTCGTGCATGAGCCTTTAGGCTCATCTTCAACACTCTTGCAGCCATCCTCTAGTGAAACAGCATAG 1176 0.4269 MESKSGSSKRKNGAKGEIVDGSKIMELVGNEQVFSNFVDNKFDELDKDRDGKLSIKELEPAVADIGAGLGLPAQGTSPDSDHIYFEVLNEFTHGKQEKVSKIEFKEVLSDILLGMAAGLKRDPIVILRMEGEDLLEFVNGPSYEAEMASIFSQIESPSGSLREHVIEAFGRLTVDQGIPPTSDSWICLNVLSFPYPPDLQFGIKVFNNIVDPALSQAGPALDKPASQETFFEEFKKVAFSVVDFLKEKPVIVAHSENTFDGRGVKRLLSNKFELDRTLNLALENLPKDRNGKISKDYLRVALDLVSPSAGLPPVGAIEEMDKVIVEAFKMVNTEDTNTVGEEEFKKILTEILGGIMLQLEGNPISVSSNSVVHEPLGSSSTLLQPSSSETA* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02463 391 PANTHER CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED 17 127 - -
Lapu9g02463 391 ProSiteProfiles EF-hand calcium-binding domain profile. 33 68 IPR002048 GO:0005509
Lapu9g02463 391 SMART efh_1 277 305 IPR002048 GO:0005509
Lapu9g02463 391 SMART efh_1 323 351 IPR002048 GO:0005509
Lapu9g02463 391 SMART efh_1 37 65 IPR002048 GO:0005509
Lapu9g02463 391 ProSiteProfiles EF-hand calcium-binding domain profile. 319 354 IPR002048 GO:0005509
Lapu9g02463 391 Gene3D - 38 365 - -
Lapu9g02463 391 SUPERFAMILY EF-hand 41 361 IPR011992 -
Lapu9g02463 391 ProSitePatterns EF-hand calcium-binding domain. 46 58 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02463 Lapu-Chr9 38997425 39001462 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02463 1 390 EF-hand Containing Proteins AT4G38810 60.870 8.68e-165 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02463 - - gmx:100787083 665.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02463 9 38997425 39001462 Lapu9g02463 9 38997425 39001462 ECH