Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02440 ATGGCACTTTCCACTTCGAACCTTTTCCCGGTTCTTCTTCTCCTTCTTCTTTCTCTCTTCGTTATTTCGGGAACCGCTCATGATTACCAGGACGCATTGTCCAAGGCAATCCTCTTCTTCGAGGGCCAACGCTCCGGATTCTTGCCGCAGGACCAGAGAATGAAGTGGCGCGCCAATTCGGGTCTCAGCGACGGCTGGACCTACAACTTCGACCTCACCGGCGGCTACTACGACGCCGGCGACAACGTCAAGTTCGGGTTTCCGATGGCATTCACCACCACAATGCTCTCCTGGAGTGTGATCGAATTCGGAGACATGATGCCTCCCAACGAGCACAGAAACGCGCTGGTGGCAGTCCGTTGGGCTACCGATTATTTGCTCAAAACCGTTTCTCAGCCCAACCGCATTTTCGTTCAGGTGGGTGATCCAATCTCTGACCACAACTGTTGGGAAAGACCCGAGGACATGGACACAAGTAGGACTGTGTATGCTGTTGATGCACCGAACCCAGCTTCGGATGTGGCCGGTGAAACTGCTGCGGCACTAGCTGCTTCGTCTATGGCTTTTCGTTCATCGGATCCTGCTTATTCAGAAACTTTGCTACGAAATGCTGTCAAGGCATTTCAACTTGCAGATAACTTTAGGGGTGCCTACAGTGACAATGCTAATGTGAGGGATGGTGTCTGCCCATATTATTGCGATTTCGATGGATATCAGGACGAATTGTTATGGGGAGCCGCATGGCTGAGGAGGGCCACTCAAGACGACAATTTCCTGAACTATATTCAAAGCAATGGCAAAACACTCGGTGCTGAAGAAAATATAAATGAGTTCGGTTGGGACAACAAGCATGCTGGCCTTAATGTTCTTGTCTCCAAGGAAGTTCTAGAAGGAAATGTATTGTCTCTTGATTCCTACAAGACTTCGGCAGAGAGCTTTCTGTGCACACTGATACCCGAAACATCAAGTTCACATATAGAGTACACTCCCGGTGGACTCATATACAGGCCAGGGGGTAGCAACTTGCAGCATGCAACTTCAATTGCTTTCCTTGAACTGGTTTACGCTAATTACCTATCACGCACTTCACAAACCATCAATTGTGGGAACATCTATGTTAATGCAGAAAGACTTCGCCAACTTGCTAAGAAGCAAGTTGATTACATTTTGGGCGATAACCCAATGGGTATGTCGTACATGGTTGGCTATGGCAACAAGTATCCACAGCGTATTCACCATCGTGGCTCCTCTTTACCCTCCATTAAGGACCATCCTCAAGTCATTGCCTGCAAAGAAGGTTCAATCTACTTCAACTCAACCAATCCTAATCCCAATGTTCTCGTGGGAGCCATTGTGGGAGGACCAGGAGAAGATGATGTGTATGGGGATGACAGGGCTGATTTTAGGAAGTCCGAACCAACCACATACATCAATGCACCATTTGTTGGGATTTTAGCATACTTCGTTGCTAATCCCAATCCTTGA 1485 0.4808 MALSTSNLFPVLLLLLLSLFVISGTAHDYQDALSKAILFFEGQRSGFLPQDQRMKWRANSGLSDGWTYNFDLTGGYYDAGDNVKFGFPMAFTTTMLSWSVIEFGDMMPPNEHRNALVAVRWATDYLLKTVSQPNRIFVQVGDPISDHNCWERPEDMDTSRTVYAVDAPNPASDVAGETAAALAASSMAFRSSDPAYSETLLRNAVKAFQLADNFRGAYSDNANVRDGVCPYYCDFDGYQDELLWGAAWLRRATQDDNFLNYIQSNGKTLGAEENINEFGWDNKHAGLNVLVSKEVLEGNVLSLDSYKTSAESFLCTLIPETSSSHIEYTPGGLIYRPGGSNLQHATSIAFLELVYANYLSRTSQTINCGNIYVNAERLRQLAKKQVDYILGDNPMGMSYMVGYGNKYPQRIHHRGSSLPSIKDHPQVIACKEGSIYFNSTNPNPNVLVGAIVGGPGEDDVYGDDRADFRKSEPTTYINAPFVGILAYFVANPNP* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02440 494 SUPERFAMILY Six-hairpin glycosidases 10 490 IPR008928 GO:0005975
Lapu9g02440 494 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 461 479 IPR033126 -
Lapu9g02440 494 FunFam Endoglucanase 25 493 - -
Lapu9g02440 494 PANTHER ENDO-1,4-BETA-GLUCANASE 13 489 - -
Lapu9g02440 494 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 388 414 IPR018221 -
Lapu9g02440 494 Pfam Glycosyl hydrolase family 9 29 485 IPR001701 GO:0004553|GO:0005975
Lapu9g02440 494 Gene3D - 25 492 IPR012341 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02440 Lapu-Chr9 38835734 38839772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02440 6 491 Glycoside Hydrolase AT1G70710 60.861 0.0 615
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02440 K01179 - gmx:100799911 924.465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02440 9 38835734 38839772 Lapu9g02440 9 38835734 38839772 ECH