Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02436 ATGAGTTCAGACAGCCGCAGCAGGAGCAGAAGCAGAAGCAGGAGCCCAATGGACCGTAAGATCCGATCTGATCGATTTTCCTACCGTGATGCACCTTACAGGAGAGATTCACGTCGGGGTTTCAGCCGAGACAATCTGTGCAAGAACTGCAAGAGGCCTGGACATTATGCAAGAGAATGCCCTAATGTTGCAATTTGCCACAACTGTGGCCTCCCTGGGCACATTGCTTCTGAATGTACCACGAAGTCACTCTGCTGGAACTGTAAAGAACCTGGCCACATGGCCAGTAATTGTCCAAATGAGGGCATTTGCCATACCTGTGGTAAAGCTGGACACCGTGCTAGGGAATGCACCGCTCCTCCAATGCCTCCTGGAGACTTAAGGTTGTGCAACAACTGTTATAAACAGGGCCACATTGCAGCTGAATGTACTAATGAGAAGGCATGCAACAACTGTAGGAAGACAGGGCACTTGGCACGTGATTGTCCCAATGATCCTATTTGTAACTTGTGCAATGTTTCTGGGCATGTGGCTAGACAGTGTCCAAAAGCCAATGTTCTTGGAGATCGCAGTGGTGGCGGTGGCGGAGGAGGAGGTCGTGGTGGTGGTGGTGGTGGTTACCGAGATGTTGTTTGCAGGAACTGCCAGCAATTAGGTCACATGAGTAGGGATTGCATGGGCCCCTTGATGATTTGCCACAATTGTGGAGGTCGTGGTCACCTGGCATACGAGTGCCCTTCAGGTCGGTTTATGGATCGCTACCCTCGGAGGTATTGA 777 0.5109 MSSDSRSRSRSRSRSPMDRKIRSDRFSYRDAPYRRDSRRGFSRDNLCKNCKRPGHYARECPNVAICHNCGLPGHIASECTTKSLCWNCKEPGHMASNCPNEGICHTCGKAGHRARECTAPPMPPGDLRLCNNCYKQGHIAAECTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKANVLGDRSGGGGGGGGRGGGGGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMDRYPRRY* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02436 258 Gene3D - 82 101 - -
Lapu9g02436 258 SUPERFAMILY Retrovirus zinc finger-like domains 83 121 IPR036875 GO:0003676|GO:0008270
Lapu9g02436 258 ProSiteProfiles Zinc finger CCHC-type profile. 212 225 IPR001878 GO:0003676|GO:0008270
Lapu9g02436 258 MobiDBLite consensus disorder prediction 1 29 - -
Lapu9g02436 258 SUPERFAMILY Retrovirus zinc finger-like domains 37 82 IPR036875 GO:0003676|GO:0008270
Lapu9g02436 258 ProSiteProfiles Zinc finger CCHC-type profile. 168 183 IPR001878 GO:0003676|GO:0008270
Lapu9g02436 258 SMART c2hcfinal6 65 81 IPR001878 GO:0003676|GO:0008270
Lapu9g02436 258 SMART c2hcfinal6 167 183 IPR001878 GO:0003676|GO:0008270
Lapu9g02436 258 SMART c2hcfinal6 103 119 IPR001878 GO:0003676|GO:0008270
Lapu9g02436 258 SMART c2hcfinal6 231 247 IPR001878 GO:0003676|GO:0008270
Lapu9g02436 258 SMART c2hcfinal6 84 100 IPR001878 GO:0003676|GO:0008270
Lapu9g02436 258 SMART c2hcfinal6 46 62 IPR001878 GO:0003676|GO:0008270
Lapu9g02436 258 SMART c2hcfinal6 148 164 IPR001878 GO:0003676|GO:0008270
Lapu9g02436 258 SMART c2hcfinal6 211 227 IPR001878 GO:0003676|GO:0008270
Lapu9g02436 258 SMART c2hcfinal6 129 145 IPR001878 GO:0003676|GO:0008270
Lapu9g02436 258 SUPERFAMILY Retrovirus zinc finger-like domains 201 249 IPR036875 GO:0003676|GO:0008270
Lapu9g02436 258 ProSiteProfiles Zinc finger CCHC-type profile. 85 100 IPR001878 GO:0003676|GO:0008270
Lapu9g02436 258 Gene3D - 6 81 - -
Lapu9g02436 258 SUPERFAMILY Retrovirus zinc finger-like domains 124 165 IPR036875 GO:0003676|GO:0008270
Lapu9g02436 258 ProSiteProfiles Zinc finger CCHC-type profile. 232 247 IPR001878 GO:0003676|GO:0008270
Lapu9g02436 258 ProSiteProfiles Zinc finger CCHC-type profile. 66 79 IPR001878 GO:0003676|GO:0008270
Lapu9g02436 258 Gene3D - 102 146 - -
Lapu9g02436 258 Gene3D - 147 196 - -
Lapu9g02436 258 ProSiteProfiles Zinc finger CCHC-type profile. 104 117 IPR001878 GO:0003676|GO:0008270
Lapu9g02436 258 Pfam Zinc knuckle 66 80 IPR001878 GO:0003676|GO:0008270
Lapu9g02436 258 Pfam Zinc knuckle 103 118 IPR001878 GO:0003676|GO:0008270
Lapu9g02436 258 Pfam Zinc knuckle 85 100 IPR001878 GO:0003676|GO:0008270
Lapu9g02436 258 Pfam Zinc knuckle 231 247 IPR001878 GO:0003676|GO:0008270
Lapu9g02436 258 Pfam Zinc knuckle 167 183 IPR001878 GO:0003676|GO:0008270
Lapu9g02436 258 Pfam Zinc knuckle 46 62 IPR001878 GO:0003676|GO:0008270
Lapu9g02436 258 Pfam Zinc knuckle 211 225 IPR001878 GO:0003676|GO:0008270
Lapu9g02436 258 Pfam Zinc knuckle 148 164 IPR001878 GO:0003676|GO:0008270
Lapu9g02436 258 Gene3D - 206 249 - -
Lapu9g02436 258 ProSiteProfiles Zinc finger CCHC-type profile. 149 164 IPR001878 GO:0003676|GO:0008270
Lapu9g02436 258 PANTHER - 7 253 - -
Lapu9g02436 258 ProSiteProfiles Zinc finger CCHC-type profile. 47 62 IPR001878 GO:0003676|GO:0008270
Lapu9g02436 258 ProSiteProfiles Zinc finger CCHC-type profile. 130 145 IPR001878 GO:0003676|GO:0008270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02436 K09250 - gmx:100775501 530.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02436 9 38798213 38803096 Lapu9g02436 9 38798213 38803096 ECH