Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02378 ATGAAAGGTGCTGTTCTCGTCGCTATTGCCGCTTCCATCGGTAATTTTCTCCAGGGATGGGATAATGCTACCATCGCCGGGGCTATTGTTTACATTAAGAAAGACCTTGCGTTGCAAACAACTATGGAAGGGCTTGTGGTGGCCATGTCCCTGATTGGGGCGACGGTTATCACCACATGCTCTGGTCCTATATCGGATTGGCTCGGTCGGCGACCCATGTTGATAATCTCATCTGTGCTCTATTTCTTGGGTGGTTTGGTGATGCTTTGGTCCCCTAATGTGTATGTGTTGTGCTTGGCGAGGTTACTTGATGGATTTGGGATTGGCCTTGCTGTGACTCTTGTCCCGGTCTATATATCTGAAACAGCACCCTCTGAAATAAGGGGTTCTTTGAATACGCTTCCTCAGTTCAGTGGTTCTGGAGGCATGTTTTTGTCCTACTGTATGGTTTTTGGCATGTCATTGACTCCCTCGCCTAGCTGGAGACTCATGCTTGGGGTTCTGTCTATTCCTTCGCTTCTCTATTTTGCACTGACAATTTTTTTCTTGCCTGAATCTCCTCGGTGGCTGGTCAGCAAAGGAAGGATGCTGGAGGCTAAAAAGGTGCTCCAAAGATTGCGCGGAAGGGAGGATGTTTCAGGCGAGATGGCATTGCTGGTTGAAGGTCTCGGGATTGGAGGTGATACATCTATAGAAGAGTACATAATTGGCCCTGCTGAAGAGGTGGCTGATGGTCGAGAACTGGCAACAGAGAAAGATAAAATTCGATTATATGGATCCCAAGCCGGCCTCTCTTGGTTAGCAAAACCTGTCACTGGACAGAGTTCTATTGGCCTTGCATCACGCCATGGAAGCATCATCAACCAAAGCATGTCCCTCATGGATCCTATGGTGACACTGTTTGGTAGCATTCATGAGAAGCTCCCCGAGACAGGAACTGGAAGCATGCGAAGCACTTTGTTTCCAAATTTTGGAAGCATGTTCAGCACTGCTGAGCCACATGTTAAAAATGAACAGTGGGATGAAGAGAGCTTACAAAGGGAAGGTGAGGACTACATGTCAGATGCGGCTGGTGGAGACTCTGATGATAATTTGCAAAGTCCTTTAATCTCACGTCAAACAACAAGCCTTGAAAAGGACATGCCTCCTCCTCCTTCCCATGGAAGTATCCTGAGCAGCATGAGGCGTCACAGTAGTCTTATGCAAGGATCAGCTGAGCAAGTTGGTAGTACAGGCATTGGTGGTGGCTGGCAGCTGGCATGGAAATGGACTGATAAAGGTGAAGAGGGAAAAAAACAAGGAGAGTTTAAAAGGATTTATTTACACGAGGAGGGAGTTTCTGCATCCCGTCGTGGATCCGTTGTTTCAATTCCTGGTGAAGGTGAATTTATCCAGGCTGCTGCCTTGGTAAGCCAACCTGCTCTTTACTCCAAGGAGCTTATCGATGGACATCCAGTTGGTCCCGCAATGGTTCACCCATCTGAGACAGCTTCAAAGGGGCCAAGTTGGAAAGCTCTTCTTGAACCTGGGGTTAAGCATGCATTGATTGTTGGAGTTGGAATACAAATACTTCAGCAGTTTTCAGGGATAAATGGGGTTCTATATTACACACCTCAAATCCTCGAAGAGGCCGGTGTTGAAGTTCTTCTTTCAGATATAGGCATTGGCTCAGAGTCCGCCTCATTCCTCATCAGTGCTTTCACAACCTTCTTGATGCTTCCTTGTATAGGATTAGCCATGAAGCTCATGGATGTTTCAGGCAGAAGGCAATTGTTACTTGCTACAATTCCCGTGCTGATTGTGTCCCTGATTATTTTGGTCATTGGAAGCCTAGTAAATTTTGGCAATGTGGCCCATGCAGCAATCTCAACTACATGCGTTGTGGTTTATTTCTGCTGCTTTGTGATGGGTTACGGACCAATTCCAAACATTCTTTGCTCAGAGATTTTCCCCACTAGAGTGCGTGGCCTCTGCATTGCCATATGTGCGTTAGTGTTCTGGATTGGAGACATCATTATCACATACTCGCTGCCTGTGATGCTCAGCTCTTTAGGACTTGGTGGTGTCTTCGCCATTTATGCCGTCGTCTGTTTCATCTCCTGGATATTTGTGTTTTTGAAGGTTCCAGAAACAAAGGGCATGCCCCTTGAAGTCATCTCTGAATTCTTTTCTGTTGGTGCAAGGCAGGCTGCTGCGGCCAAGAATGAGTAG 2211 0.469 MKGAVLVAIAASIGNFLQGWDNATIAGAIVYIKKDLALQTTMEGLVVAMSLIGATVITTCSGPISDWLGRRPMLIISSVLYFLGGLVMLWSPNVYVLCLARLLDGFGIGLAVTLVPVYISETAPSEIRGSLNTLPQFSGSGGMFLSYCMVFGMSLTPSPSWRLMLGVLSIPSLLYFALTIFFLPESPRWLVSKGRMLEAKKVLQRLRGREDVSGEMALLVEGLGIGGDTSIEEYIIGPAEEVADGRELATEKDKIRLYGSQAGLSWLAKPVTGQSSIGLASRHGSIINQSMSLMDPMVTLFGSIHEKLPETGTGSMRSTLFPNFGSMFSTAEPHVKNEQWDEESLQREGEDYMSDAAGGDSDDNLQSPLISRQTTSLEKDMPPPPSHGSILSSMRRHSSLMQGSAEQVGSTGIGGGWQLAWKWTDKGEEGKKQGEFKRIYLHEEGVSASRRGSVVSIPGEGEFIQAAALVSQPALYSKELIDGHPVGPAMVHPSETASKGPSWKALLEPGVKHALIVGVGIQILQQFSGINGVLYYTPQILEEAGVEVLLSDIGIGSESASFLISAFTTFLMLPCIGLAMKLMDVSGRRQLLLATIPVLIVSLIILVIGSLVNFGNVAHAAISTTCVVVYFCCFVMGYGPIPNILCSEIFPTRVRGLCIAICALVFWIGDIIITYSLPVMLSSLGLGGVFAIYAVVCFISWIFVFLKVPETKGMPLEVISEFFSVGARQAAAAKNE* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02378 736 ProSitePatterns Sugar transport proteins signature 2. 103 128 IPR005829 GO:0016020|GO:0022857|GO:0055085
Lapu9g02378 736 FunFam Monosaccharide-sensing protein 2 476 725 - -
Lapu9g02378 736 MobiDBLite consensus disorder prediction 335 354 - -
Lapu9g02378 736 FunFam monosaccharide-sensing protein 2 2 247 - -
Lapu9g02378 736 Pfam Sugar (and other) transporter 7 218 IPR005828 GO:0016020|GO:0022857|GO:0055085
Lapu9g02378 736 Pfam Sugar (and other) transporter 500 723 IPR005828 GO:0016020|GO:0022857|GO:0055085
Lapu9g02378 736 PANTHER PROTON MYO-INOSITOL COTRANSPORTER 5 730 - -
Lapu9g02378 736 ProSitePatterns Sugar transport proteins signature 1. 61 78 IPR005829 GO:0016020|GO:0022857|GO:0055085
Lapu9g02378 736 PRINTS Sugar transporter signature 98 117 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lapu9g02378 736 PRINTS Sugar transporter signature 647 659 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lapu9g02378 736 PRINTS Sugar transporter signature 525 535 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lapu9g02378 736 PRINTS Sugar transporter signature 624 645 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lapu9g02378 736 PRINTS Sugar transporter signature 15 25 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lapu9g02378 736 MobiDBLite consensus disorder prediction 332 367 - -
Lapu9g02378 736 Gene3D MFS general substrate transporter like domains 495 733 IPR036259 -
Lapu9g02378 736 Gene3D MFS general substrate transporter like domains 2 279 IPR036259 -
Lapu9g02378 736 ProSiteProfiles Major facilitator superfamily (MFS) profile. 7 712 IPR020846 GO:0022857
Lapu9g02378 736 SUPERFAMILY MFS general substrate transporter 5 717 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02378 Lapu-Chr9 38322406 38327878 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02378 1 736 Organic Solute Cotransporters AT4G35300 70.470 0.0 984
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02378 - - gmx:100791976 1369.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02378 9 38322406 38327878 Lapu9g02378 9 38322406 38327878 ECH