Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02374 ATGAAAAGAGGCATCATGCGGTCGAATCTGTTTCCGCTTCTCTTTGCATTTGCTTTTCTGTCTTCGCCGGTGTTCTCTGCTTCGGATCTGATCCTCGCCAAGGTTGACCGTCGTATTGATCTGACATCACAAATTGTGCGCATCACTACTTCGCTAAAGGTGGAGAACACGGGATCTGATGTTGTCTCTGAGATTTTGCTGTCCTTTCCTGAAAGCCAGGCAAAACACCTGGCATACTTGAAAGCAACACTTAGCGAAGGGAAGGGGAAAGTAAAAACATCTTCTGGTGTTGGTTTACCCTTTAAAGCTGTCCACCCTAAAGATGCACCTCCTGCCTTGACAATTTACTCCGTATCTTTACCAAAGGGGCTTGGGAAGGGACATAGTTTGACATTAGATGTCTTGGCTGTTTTTACCCACATATTGCAACCATTTCCAGAGAAAATCAACCAGGGTGACATCCAACTTCTACTGTTTCAAGAGAGTGCACAATATCTCTCTCCGTATGCTGTCAAGGCCCAATCACTCACTGTTAAGTTGCCTGATGCAAGAATAGAGTCCTATTCAAAACTAGAAAATGCTAAACTTCAGGGATCTGAATTAAAATATGGTCCATATGAGAATCTTCCTCCTTTCTCATTCTTACCCATAGTTATTCACTTTGAGAATAACCAACCCTTTGCTGTTGCTAAAGAGTTAGTGCGAGAGATCGAAATTTCTCATTGGGGCAATGTACAGATCACAGAGCATTACGACATTATTCATGCTGGAGCTCAGAGCAAAGGAGAATTTTCTAGGCTTGACTATCAGACCAGGCCATATTTAAGGGGTGCATCAGCCTTTAGGCGTCTTGTTGCCAAGCTGCCACCAAGAGCCCATTCAGTGTACTATAGGGATGAAATTGGCAACATTTCCACTTCTAGTTTATGGGGTGATTCAAAAAAGATTGAACTGGAGATTGAACCTAGGTACCCTATGTTTGGTGGCTGGAAAACTGCCTTTACTATTGGATATGGCTTGCCACTTCAGGACTTCTTATTTGGATTGGATGGAAAACGCTTCCTTAATATCTCTTTTGGTGCCCCTATCAACGAGTTGGTGATTGACACTATTTTTGTGAAGGTTGTTTTGCCAGAGGGTTCTAAAGATATTTCAGTATCGGTTCCATTTCCTGTGAAAGAATGGCAGGAGACGAAGATTTCTCACTTGGATATTGTTGGTAGACCTGTTGTTGTTCTGGAGAAGAACAATGTTGTCCCTGAGCATAATGAGCATTTCCAGGTCTACTATAAGTTCAACAGTCTTTCTATGCTCAGGGAGCCTTTGATGTTGATTTCTGGGTTTTTCTTTCTGTTTGTTGCTTGCATTGTCTACTCACATGTAGATATATCAATCTCCAAATCTTCTGCATCTTATTTGGCTAAGCTCCAGTGGGATGAGGTGCAAGCAACTATTCAGCAGGTCCATGGTATAATTAGCCGTTGCTTAACAGCACATGACAAGCTAGAAACGTCATTGCACGATCTTTCTAGGACCGGGGACGTTCAAGCCTGTAAAGCAACCCGAAAATCAGTAGATAGCTCATTGAAAGAGCTCTCTAAAGAGTTGAAGCAACCATTGACCTTTTTGCAATCTTCTCCACAGGCTGCTCAAATATTACCAAAGCTGGAGGAACTTGTTACTAAGGAGAGAGAGTTGCAGGAGAAACTTGTATTGAAACACACTACAGTTGTAGACGGCTATGAGAAGAAGTTAGGAGGAAGGGAAATTGAGAATCGGATTGCTTCTTATCAACATAAAATTACTGCTTTGAGACGGGAGGTTGATGATCTTATGGACTTGATTGATGAGATATGA 1857 0.4222 MKRGIMRSNLFPLLFAFAFLSSPVFSASDLILAKVDRRIDLTSQIVRITTSLKVENTGSDVVSEILLSFPESQAKHLAYLKATLSEGKGKVKTSSGVGLPFKAVHPKDAPPALTIYSVSLPKGLGKGHSLTLDVLAVFTHILQPFPEKINQGDIQLLLFQESAQYLSPYAVKAQSLTVKLPDARIESYSKLENAKLQGSELKYGPYENLPPFSFLPIVIHFENNQPFAVAKELVREIEISHWGNVQITEHYDIIHAGAQSKGEFSRLDYQTRPYLRGASAFRRLVAKLPPRAHSVYYRDEIGNISTSSLWGDSKKIELEIEPRYPMFGGWKTAFTIGYGLPLQDFLFGLDGKRFLNISFGAPINELVIDTIFVKVVLPEGSKDISVSVPFPVKEWQETKISHLDIVGRPVVVLEKNNVVPEHNEHFQVYYKFNSLSMLREPLMLISGFFFLFVACIVYSHVDISISKSSASYLAKLQWDEVQATIQQVHGIISRCLTAHDKLETSLHDLSRTGDVQACKATRKSVDSSLKELSKELKQPLTFLQSSPQAAQILPKLEELVTKERELQEKLVLKHTTVVDGYEKKLGGREIENRIASYQHKITALRREVDDLMDLIDEI* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02374 618 PANTHER RIBOPHORIN I 10 474 IPR007676 GO:0006486|GO:0016020
Lapu9g02374 618 Pfam Ribophorin I 33 458 IPR007676 GO:0006486|GO:0016020
Lapu9g02374 618 Coils Coil 587 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02374 Lapu-Chr9 38299971 38304803 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02374 22 556 Miscellaneous Gene Families AT1G76400 66.916 0.0 751
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02374 K12666 - gmx:100817203 1076.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02374 9 38299971 38304803 Lapu9g02374 9 38299971 38304803 ECH