Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02340 ATGATGGAGGAAGTAGTGGAAATAAAGGTAAGTACAAAACTGAGAGAGACTCAGAGCTCCGAAACCATCTCAACTCCACCACTTCAAGTTTCATCACGTGATGGGGTCCCCAAAGCTCCCAAAAGCCCTTTTGCATCTCGTTTCATGAGCACCCCTTTAGCCAGTCCCATGAAGAAGGCCATTGAAAACATGCAAGGTTACTTGGGAGAAGTTGGTCGCTTCACAAAGCTTGATCAACAAGATGATTGGCTTCCCATCACAGAGTCCAGAAAGGGAAACGCATACTACGCTGCGTTTCATGTTCTTTCTTCAGGGATCGGATTTCAGGCCCTTGTTCTTCCCTTGGCCTTCACCACTCTTGGCTGGACTTGGGGAATCATATGTCTCTGTGTGGCTTTTACATGGCAACTCTACACGCTGTGGTTACTGATTCAGCTTCACGAATCAGACTCAGGGGTGCGCCATAGTAGGTACCTCAGACTTGCTATGGCAGCATTCGGATTGAAGAAGGGAAAACTAATGGCTCTGTTCCCAATAATGTACTTATCGGGTGGGACGTGTGTGACACTGATCATGATCGGTGCTAGCACAATGAAGATATTCTTTCAGATGGTGTTCGGAGCGCCATGCCCCCTCTCAACCATTGAGTGGTATTTGGTGTTTACATGCACAGCCATTTTGCTTGCGCAGTTACCAAACCTCAATTCAATTGCAGGGGTTTCCCTCATTGGAGCCATCACTGCCGTAGGTTACTGTGCTCTTATATGTATAGTATCTGTGGTCCAAGGTAGACTTGCCAATGTATCGTATGAGCCTTCAAGGGGACAATCAAAGGCTACCATGGTTTTTAGCGCGTGGAATGCACTAGGCATCATTGCCTTTGCTTTCCGCGGTCACAATCTTGTGTTGGAAATACAGGGAACCATACCTTCGGACGCTAAGCAACCCTCGTGCATGGCCATGTGGAGAGGTGTTATGTTTGCTTACCTGGTCATCGCCTTGTGTTTGTTCCCCCTTGCAATTGGAGGTTATTGGGCCTATGGAAATTTAATACCTACCAACGGAGGGATGTTAGGTGCTTTACAGAAATACCATGAACATGATACGTCAAAATTCATCATTGCTTTGACAAGCTTGCTAGTTGTTATAAACAGCCTCAGTTCCTTCCAAATCTATGCTATGCCAGTATTTGACAATCTGGAATTTAAATACACTAGCAAGAAGAACAAACCTTGCCCGCGATGGCTGCGGATAGCCTTCAGGGGACTCTTTGGGTGCCTAGCATTTTTTATTGCTGTGGCGTTACCATTCTTACCGAGTTTGGCAGGTCTGATTGGTGGCGTTGCTCTACCAATAACCTTAGCTTATCCCTGTTTGATGTGGATACAGATTAAGAAACCACAGAAATGTAGCACAAACTGGTACCTGAACTGGACACTAGGAGTTATTGGGATGATTCTGAGTGTACTGGTTGTCACAGGAGCCATTTGGGGCTTAGTAGTACAGGGCATACAGATCCATTTCTTCCGTCCACAGTAG 1539 0.4613 MMEEVVEIKVSTKLRETQSSETISTPPLQVSSRDGVPKAPKSPFASRFMSTPLASPMKKAIENMQGYLGEVGRFTKLDQQDDWLPITESRKGNAYYAAFHVLSSGIGFQALVLPLAFTTLGWTWGIICLCVAFTWQLYTLWLLIQLHESDSGVRHSRYLRLAMAAFGLKKGKLMALFPIMYLSGGTCVTLIMIGASTMKIFFQMVFGAPCPLSTIEWYLVFTCTAILLAQLPNLNSIAGVSLIGAITAVGYCALICIVSVVQGRLANVSYEPSRGQSKATMVFSAWNALGIIAFAFRGHNLVLEIQGTIPSDAKQPSCMAMWRGVMFAYLVIALCLFPLAIGGYWAYGNLIPTNGGMLGALQKYHEHDTSKFIIALTSLLVVINSLSSFQIYAMPVFDNLEFKYTSKKNKPCPRWLRIAFRGLFGCLAFFIAVALPFLPSLAGLIGGVALPITLAYPCLMWIQIKKPQKCSTNWYLNWTLGVIGMILSVLVVTGAIWGLVVQGIQIHFFRPQ* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02340 512 PANTHER OS05G0424000 PROTEIN-RELATED 94 495 - -
Lapu9g02340 512 Pfam Transmembrane amino acid transporter protein 91 500 IPR013057 -
Lapu9g02340 512 MobiDBLite consensus disorder prediction 16 42 - -
Lapu9g02340 512 MobiDBLite consensus disorder prediction 16 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02340 Lapu-Chr9 37960248 37964652 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02340 2 511 Organic Solute Cotransporters AT1G47670 55.299 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02340 K26385 - gmx:100788860 917.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02340 9 37960248 37964652 Lapu9g02340 9 37960248 37964652 ECH