Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02328 ATGGACCCTCTTTCTCTCTTCTGCACCGGAGCACTCCTCGCCGGCGGCCTCTACTGGTTCGTGTGCGTGCTGGGCCCAGCCGAGCAAAAGGGAAAGCGGGCCACCGATCTGTCCGGCGGGTCCATCTCGGCGGAGAAAGTTCAGGACAACTACAAGCAGTACTGGTCGTTCTTCCGCCGCCCGAAGGAGATCGAAACGGCGGAGAAAGTCCCGGACTTTGTCGACACCTTCTACAATTTAGTCACTGACATCTACGAGTGGGGGTGGGGCCAGTCCTTCCACTTCTCCCCATCGATCCCGGGCAAGTCCCACCGCGAAGCCACGCGCCTCCATGAGGAGATGGCAGTCGATCTCATCCAGGCCCGCCCCGGAGACAGAGTCCTGGACGTGGGCTGCGGCGTGGGCGGGCCCATGCGCGCCATCGCGGCCCACTCCCGCGCGAACGTTGTGGGCATCACCATCAACGACTACCAGGTGAACCGCGCCCGCCTGCACAACAGGAAAGCCGGCTTGGACTCCCTCTGTGAGGTCGTCTGCGGCAATTTCCTCAGCATGCCCTTCCCCGACAACTCCTTCGACGGCGCCTACTCTATCGAGGCTACGTGTCACGCGCCCAAGCTCGAAGAGGTTTACGACGAAATCTTCCGCGTCCTGAAGCCTGGAGCGCTCTACGTGTCGTACGAGTGGGTCACTACCGACAAGTACCGCGCCGACGACCCCGAACACGTGGAGATCATCCAGGGCATTGAGAGGGGTGACGCCTTGCCTGGCCTCAGAAGCTACGCTGACATAGCCGAAACCGCGCGTAAGGTAGGGTTCGTTGTGGTTAAGGAGCGGGATCTGGCTAAGCCGCCGGCTGAACCCTGGTGGAGCCGCTTGAAGATGGGCCGGATCGCCTACTGGAGGAACCATATCGTCGTAACTGTTCTCGCCGCCTTGGGAATCGCGCCCAAGGGAACCGTTGATGTCCATGAGATGCTTTTCAAGACTGCTGACTATTTGACCAGAGGGGGTGACTCTGGGATTTTCTCCCCGATGCACATGATCCTCTGCAGAAAGCCCCACGCCAGTGACGACTACGCCCAAACCTGA 1092 0.6071 MDPLSLFCTGALLAGGLYWFVCVLGPAEQKGKRATDLSGGSISAEKVQDNYKQYWSFFRRPKEIETAEKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSHREATRLHEEMAVDLIQARPGDRVLDVGCGVGGPMRAIAAHSRANVVGITINDYQVNRARLHNRKAGLDSLCEVVCGNFLSMPFPDNSFDGAYSIEATCHAPKLEEVYDEIFRVLKPGALYVSYEWVTTDKYRADDPEHVEIIQGIERGDALPGLRSYADIAETARKVGFVVVKERDLAKPPAEPWWSRLKMGRIAYWRNHIVVTVLAALGIAPKGTVDVHEMLFKTADYLTRGGDSGIFSPMHMILCRKPHASDDYAQT* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02328 363 Pfam Sterol methyltransferase C-terminal 291 354 IPR013705 GO:0006694|GO:0008168
Lapu9g02328 363 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 77 354 IPR029063 -
Lapu9g02328 363 ProSiteProfiles SAM-dependent methyltransferase Erg6/SMT-type domain profile. 77 354 IPR030384 GO:0008168
Lapu9g02328 363 FunFam Methyltransferase 44 305 - -
Lapu9g02328 363 Pfam Methyltransferase domain 128 224 IPR013216 GO:0008168
Lapu9g02328 363 CDD AdoMet_MTases 126 230 - -
Lapu9g02328 363 Gene3D Vaccinia Virus protein VP39 44 309 IPR029063 -
Lapu9g02328 363 PANTHER - 1 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02328 Lapu-Chr9 37851698 37853119 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02328 122 268 Acyl Lipid Metabolism Gene Families AT1G48600 31.333 3.10e-12 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02328 K08242 - gmx:100804517 718.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02328 9 37851698 37853119 Lapu9g02328 9 37851698 37853119 ECH