Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02323 ATGAGGGATGAAACTCAAGCTCTGGTGAATCATACTTGTCACTCCGCCAAATTCTCACAACTCCTTGCTTCGCAAGATCGTGATTATCTTCTCTCTCCAACTGGGGCTCAGGTGAAAGTTTCTGATCTTGAAGGGAAAGTAGTGGGTCTATTATTCGCTGCCAATTGGTACCCACCATGCCGCGGATTCACCCAAGTCCTAGTTGGAATCTACGAGGAGTTGAAAAGCCGTTTCCCTCAATTTGAGATTGTGTATGTGTCCTCTGACGAGGACTTGGATGCCTTCGGCATCTTCTATGGAAACATGCCGTGGCTTGCCATTCCGTTCTCTGATTTGGAAACAAAGAAATCCTTGACCAGAAAGTATGACGTGGAAGGCATTCCGTGCTTGATTTTGTTGCAACCCGAGGATCGTAAAGATGAGGCCACAGTTCGTGATGGAGTTGAACTTATTTACCGTTATGGAGTCCAAGCTTATCCATTCTGTAACCAGAGGTTGGAGCAGCTGCGAAAGGAAGACAAAGTGAAGCGTGAAAACCAGACCCTCCTTAATTTAATATCAAATCACCATAGAGACTATGTTTTGAGTCACTCTCACTCCGGAGTTAAACAGGCAGTTTTGTTATTAGAAGTGCACGCAGAGAATCCTGTTCCGCGTGACGGGTGTTGCTTCTGTACACAGGTACCAGTTGCCTCTCTAGTGGGTAAAACAATTGCACTCTATTTCTCCGCCGAATGGTGCGTCCCATGTGCCAAGTTCACTCCCAAACTCATTTCCGTTTACGAGAAGATTAAGCAGGAGCTAGCCGAGAAGGGAGAGGAAGACTTCGAAGTCGTGCTGGTATCCAGCGACCGTGACAAAGCATCCTTTGACTCCTACTACAGCAGCATGCCCTGGTTAGCCTTGCCTTTCGGTGACTCCGAGGTGAAGAACCTCGTCCGACACTTCAACGTGCAAGGGATTCCTTGGTTGGTGATTATAGGCCCTGATGGTAAAACAATAACAGTGCATGGTAGGAGCTTGATAAACTTGTATCAAGAGAACGCTTACCCTTTCACGAATGCCAAAGTGGAGGAGCTAGAAAAACAGCTTGAGGAAGAGGCCAAGGATCTTCCCGTATTGGTATACCATGAAGGGCACCGGCATGACCTGAATTTGGTGTCAGATGGGAACGGTGGAGGACCCTTTATCTGCTGTGTGTGCGATGAACAAGGGTCTAGTTGGGCCTACCAGTGTCTCCAATGTGGTTATGAAGTGCACCCCAAGTGCGTCAGAACTGTGGACCGTGACAACAGTGTGTTAATAACTAATTAA 1314 0.4734 MRDETQALVNHTCHSAKFSQLLASQDRDYLLSPTGAQVKVSDLEGKVVGLLFAANWYPPCRGFTQVLVGIYEELKSRFPQFEIVYVSSDEDLDAFGIFYGNMPWLAIPFSDLETKKSLTRKYDVEGIPCLILLQPEDRKDEATVRDGVELIYRYGVQAYPFCNQRLEQLRKEDKVKRENQTLLNLISNHHRDYVLSHSHSGVKQAVLLLEVHAENPVPRDGCCFCTQVPVASLVGKTIALYFSAEWCVPCAKFTPKLISVYEKIKQELAEKGEEDFEVVLVSSDRDKASFDSYYSSMPWLALPFGDSEVKNLVRHFNVQGIPWLVIIGPDGKTITVHGRSLINLYQENAYPFTNAKVEELEKQLEEEAKDLPVLVYHEGHRHDLNLVSDGNGGGPFICCVCDEQGSSWAYQCLQCGYEVHPKCVRTVDRDNSVLITN* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02323 437 Pfam C1 domain 379 424 IPR004146 -
Lapu9g02323 437 Pfam Thioredoxin-like 45 136 IPR012336 -
Lapu9g02323 437 Pfam Thioredoxin-like 235 332 IPR012336 -
Lapu9g02323 437 SUPERFAMILY Cysteine-rich domain 368 425 IPR046349 -
Lapu9g02323 437 CDD C1 398 430 - -
Lapu9g02323 437 PANTHER THIOREDOXIN 13 409 - -
Lapu9g02323 437 Coils Coil 350 370 - -
Lapu9g02323 437 SMART c1_12 380 429 IPR002219 -
Lapu9g02323 437 ProSiteProfiles Zinc finger phorbol-ester/DAG-type profile. 379 431 IPR002219 -
Lapu9g02323 437 SUPERFAMILY Thioredoxin-like 227 337 IPR036249 -
Lapu9g02323 437 ProSiteProfiles Thioredoxin domain profile. 20 153 IPR013766 -
Lapu9g02323 437 SUPERFAMILY Thioredoxin-like 31 138 IPR036249 -
Lapu9g02323 437 Gene3D Glutaredoxin 21 162 - -
Lapu9g02323 437 Gene3D Glutaredoxin 225 354 - -
Lapu9g02323 437 ProSiteProfiles Thioredoxin domain profile. 198 369 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02323 Lapu-Chr9 37815418 37821383 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02323 K17609 - gmx:100815038 737.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02323 9 37815418 37821383 Lapu9g02323 9 37815418 37821383 ECH