Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02305 ATGCAGCAAGGAGATTACACCTCCGCTCCTCCCTATTATCAATTTCCTCATCTCCAAAACCCAAATCCAAACCCAAACCCCAACCCCAACCCTTCCGATCCCCACCCCAATAACCTCTACGCTTCTGCACCTCCCTTCACCCCCAATTACGCTCCTTCCGATTACACCAACTATCCTCCTTCCTACCCTCAAAATCCCGATCCTATTCCACCCACTGCTCCTCCTTCCTTCGCTCCCGCTTCCTCCAACCCTAATTTCAATTCGCCCTTCGAATCAAATCCTTCCTACCAACAACCCCAGCATCAACCCTATTTCCCACCCTATGATCAGCATCAAACGCCTCCCAATTATGCCCCTCCCAACCCCAATTCCGCTCCCTCCCTATACAACTCTGCTCCCTACAGTTACACCGGAGGCTCCTCCGTTCCGCCTATTCCCACCTACGAACCACCCGCCTACGAGGCTCCCGTGAGACCCGAACACGGCGGCGGCTATTTAGACGACAGGTACGGAGGAAGCTTCAATCGGAGCCGTTCTGATTTGGGATCCGATTATTACGGGAAGAGCGGTGGTAATTCGAGGTACGAAGGTAGCGGCGGCAGTGATGATGGTTACGGAGATGGGGTGTATGCTTATCAGGGAGGCAAAGTGGAACCCTATGGGGCGCGTGGAACGACGCCGAAATCGTCGACTTGGGCGGCGTTTGATGATTATGGAAGGTCTATCAGTTTCCCCTCGCAGAAGGAATCTTCCGTGGGGGGTAAGATTGTAAAAGCGGTGCCCAAGGTTGATACCCATGAAGACGTGAAAGGTGGTGGCGTGCAAAAGTTTCGGGTCAAGCTGTTGGCGGAAAGTGGGGGCCAGAGCACCATGGATGTTCTCTGTCAGATTGGTTTGGATGGAATTCGTATGCTGGATCCAAATACCAGCCGGACATTGAGGATTTATCCTCTTGAGAACATTACAAGATGTGATAGAGTCGATTCATCTACCTTTGCATTTTGGTCAAAGAGCCCCGTGGATATTGAGCCAAGACGAATCAGATTGCAATCTAATAGTTACACCACTAACACACTCTTGGATACAGTGACAGCTGCAACCATACAGTTCAAGGAAATGGGTGGGAGCAGGAGGTCTGCTGAACCTGTGAAAACAAATGAACAGATTCAAGAAAGAAAGAAAGGTTTTGGCGATTGGATGAATCTGATTAAACCTGCCAATGAAGAGAAGGATCACTGGGTACCAGATGAAGCTGTAACAAAATGTACAGCATGTGGCACTGATTTTGGGGCTTTTATTCGCAAGCACCACTGTAGGAACTGTGGTGATATTTTCTGTGACAAATGTACACATGGTAGAATTGCTCTAACTGCTGATGAGAATGCACAGCCTGTGCGAGTTTGTGACCGGTGCATGGCAGAAGTGTCTCAGCGGCTGAGTAGTGCTAAGGAGTCATCAAGTAAACCTGCGCTGCAGAGTCATGAGGATCTTGCCAGGAAACTTCAGGAGGAGCTGGAGAAAAATCGAAAGACATCAGGTTCCAAGTCTGATGGATCTTCAAGGCGGATGAAGGAAGTTGCATGTCCTATTTGCACTGTCCATCTGCAGGTTCAGGTGCCTACCTCGGGTTCAGAGACCATTGAGTGTGGAGTGTGCCAGCACCCATTTCTTGTGAGTGCTCATTGA 1686 0.4982 MQQGDYTSAPPYYQFPHLQNPNPNPNPNPNPSDPHPNNLYASAPPFTPNYAPSDYTNYPPSYPQNPDPIPPTAPPSFAPASSNPNFNSPFESNPSYQQPQHQPYFPPYDQHQTPPNYAPPNPNSAPSLYNSAPYSYTGGSSVPPIPTYEPPAYEAPVRPEHGGGYLDDRYGGSFNRSRSDLGSDYYGKSGGNSRYEGSGGSDDGYGDGVYAYQGGKVEPYGARGTTPKSSTWAAFDDYGRSISFPSQKESSVGGKIVKAVPKVDTHEDVKGGGVQKFRVKLLAESGGQSTMDVLCQIGLDGIRMLDPNTSRTLRIYPLENITRCDRVDSSTFAFWSKSPVDIEPRRIRLQSNSYTTNTLLDTVTAATIQFKEMGGSRRSAEPVKTNEQIQERKKGFGDWMNLIKPANEEKDHWVPDEAVTKCTACGTDFGAFIRKHHCRNCGDIFCDKCTHGRIALTADENAQPVRVCDRCMAEVSQRLSSAKESSSKPALQSHEDLARKLQEELEKNRKTSGSKSDGSSRRMKEVACPICTVHLQVQVPTSGSETIECGVCQHPFLVSAH* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02305 561 Coils Coil 491 511 - -
Lapu9g02305 561 MobiDBLite consensus disorder prediction 1 15 - -
Lapu9g02305 561 CDD PTB 263 334 - -
Lapu9g02305 561 SMART fyve_4 408 477 IPR000306 GO:0046872
Lapu9g02305 561 MobiDBLite consensus disorder prediction 16 34 - -
Lapu9g02305 561 SUPERFAMILY PH domain-like 278 339 - -
Lapu9g02305 561 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 416 476 IPR017455 -
Lapu9g02305 561 MobiDBLite consensus disorder prediction 59 78 - -
Lapu9g02305 561 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 403 481 IPR013083 -
Lapu9g02305 561 MobiDBLite consensus disorder prediction 1 203 - -
Lapu9g02305 561 SUPERFAMILY FYVE/PHD zinc finger 411 484 IPR011011 -
Lapu9g02305 561 MobiDBLite consensus disorder prediction 123 142 - -
Lapu9g02305 561 Pfam FYVE zinc finger 412 476 IPR000306 GO:0046872
Lapu9g02305 561 PANTHER PROTEIN FREE1 1 561 IPR045893 GO:0036258|GO:0043130
Lapu9g02305 561 MobiDBLite consensus disorder prediction 79 107 - -
Lapu9g02305 561 FunFam Zinc finger, FYVE-type, endofin 403 481 - -
Lapu9g02305 561 MobiDBLite consensus disorder prediction 108 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02305 Lapu-Chr9 37671423 37679361 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02305 394 490 EF-hand Containing Proteins AT3G14270 31.897 5.83e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02305 - - gmx:100794840 896.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02305 9 37671423 37679361 Lapu9g02305 9 37671423 37679361 ECH