Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02298 ATGGATCACTTCAAACTATCACTGCCATTTCTACTCACACTTCATCTGTTAGCATCAGGTGTAGTCTCAACAACAATTTTCACTGTGGTCAACAAATGCGACTACACAGTGTGGCCAGGCATGCTCTCAAATGCAGGAATCGCAGCGCTTCCAACAACAGGTTTCCTTCTCCAAACCGGTGAGTCCAAAACCATCACTGCTCCAACCTCTTGGGGTGGCCGTTTCTGGGGTCGTACTCTCTGCACGCAAGATTCTGTTGGAAAATTCTCATGCATGACCGGCGATTGTGGCTCCGGCAAGCTTGAATGTGCAGGCAACGGCGCCACGCCACCAGCAACTTTGGCCGAGTTTAAACTCAACGGAGATGGAGGCCTTGATTTCTTCGACGTGAGCCTCGTCGATGGTTACAACGTGCCTATGCTAGTGGTTCCCCGGGGTGGCTCTGGTGTTAACTGTACTAGCACAGGGTGCGTTGGGGACCTCAATGGTGCGTGCCCTTCAGAACTTAGGGTTTCGAGCGTGGATGGAAAACAGAATGTGGCGTGTAAGAGCGCGTGTCAGGCGTTTGGATCCCCCCAGTATTGCTGCAAAGGCGCTTATGGGTCGCCCAATACTTGCAAGCCTACTGCATATTCGCATATTTTCAAGAATGCTTGCCCACGCGCTTACAGCTACGCATACGATGATGAGACCAGCACTTTCACGTGTGCTTCTGCAGATTACACCATCACTTTTTGCCCTTCTCTTAACGATAATTCCAGTCAGAAATCATGGCAGGGGCAAAACCCAAAATCAGATAGCGGTAGTTCTTCTTCTTCTGAGTCGCCGCAACTTAAAAATGGTACAATGGTGTATGTAGGTGCCATGGATGAAAGTGAATCATGGTCAGCAGGTACTCATGTGACTGTGAAGGAATCTCAAGCCATTGCCGGTTTTGTCAGTATGTCCATTGCTCTTTGGCTTTTGAGTCACTTATGGTAA 981 0.4924 MDHFKLSLPFLLTLHLLASGVVSTTIFTVVNKCDYTVWPGMLSNAGIAALPTTGFLLQTGESKTITAPTSWGGRFWGRTLCTQDSVGKFSCMTGDCGSGKLECAGNGATPPATLAEFKLNGDGGLDFFDVSLVDGYNVPMLVVPRGGSGVNCTSTGCVGDLNGACPSELRVSSVDGKQNVACKSACQAFGSPQYCCKGAYGSPNTCKPTAYSHIFKNACPRAYSYAYDDETSTFTCASADYTITFCPSLNDNSSQKSWQGQNPKSDSGSSSSSESPQLKNGTMVYVGAMDESESWSAGTHVTVKESQAIAGFVSMSIALWLLSHLW* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02298 326 Gene3D Thaumatin 25 247 IPR037176 -
Lapu9g02298 326 CDD TLP-PA 26 246 - -
Lapu9g02298 326 FunFam THAUMATIN-LIKE PROTEIN 1 25 247 - -
Lapu9g02298 326 PRINTS Pathogenesis-related protein signature 74 85 IPR001938 -
Lapu9g02298 326 PRINTS Pathogenesis-related protein signature 126 142 IPR001938 -
Lapu9g02298 326 PRINTS Pathogenesis-related protein signature 26 38 IPR001938 -
Lapu9g02298 326 PRINTS Pathogenesis-related protein signature 237 246 IPR001938 -
Lapu9g02298 326 Pfam Thaumatin family 31 247 IPR001938 -
Lapu9g02298 326 MobiDBLite consensus disorder prediction 254 278 - -
Lapu9g02298 326 ProSiteProfiles Thaumatin family profile. 24 247 IPR001938 -
Lapu9g02298 326 SMART tha2 27 247 IPR001938 -
Lapu9g02298 326 ProSitePatterns Thaumatin family signature. 87 103 IPR017949 -
Lapu9g02298 326 PANTHER OS03G0233200 PROTEIN 19 247 IPR001938 -
Lapu9g02298 326 SUPERFAMILY Osmotin, thaumatin-like protein 26 248 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02298 Lapu-Chr9 37601688 37604917 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02298 1 279 Receptor kinase-like Gene Family AT5G38280 53.546 1.04e-97 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02298 - - gmx:100795186 553.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02298 9 37601688 37604917 Lapu9g02298 9 37601688 37604917 ECH