Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02293 ATGAAAGGAAGCAAGAGGCCGATCCACGCCGTGACGACATGGTTTCGGCGGCAACCTCCCAAGATGAAGGCCTTTTTTGCGGTGCTATTCGGCCTGACCACATTGCTCTTCCTCAGAATCGTCGTTCATGACCACGACAGCCTTTTCGTCGCCGCCGAGTTTGTCCATGCATTGGGAATCTCCGTTCTCATTTACAAACTCACCAAGGAAAGAACCTGTGCCGGGCTTTCGCTGAAATCTCAGGAGCTGACGGCAATGTTCCTAGGTGTAAGACTTTACTGCAGTTTTGTCATGGAATATGATATACATACCTTACTCGATATGGCAACATTTGGAACGACAATCTGGGTTATTTATATGATACGCTTCAAACTCAATTCTAGTTATATGGATGATAAGGATAACCTTGCAATATACTATGTGGTGATACCTTGTGCTGTGCTGTCCTTGTTTATTCATCCAACAACCAGGCATCATGCAGTTAATAGGATTTTTTGGGCATTTTCTGTTTATCTTGAAGCTGTCTCTGTTCTCCCTCAGCTGCGGGTTATGCAGAACACTAAGATCATTGAACCATTCACCGCACACTATGTTTTTGCCCTCGGAGTTGCAAGGTTCTTGAGCTGTGCACATTGGATTCTCCAGGTATTAGATACTGGTGGACGTCTACTAACTGCATTGGGTTACGGATTGTGGCCTCCATTGGTTCTTCTATCAGAAATTGTCCAAACTTTCATCCTTGCAGATTTTTGCTACTACTACGTCAAGAGTCTTGTTGGGGGACAGCTTGTTGTTCGACTTCCTTCAGGAGTGGTGTAA 819 0.4493 MKGSKRPIHAVTTWFRRQPPKMKAFFAVLFGLTTLLFLRIVVHDHDSLFVAAEFVHALGISVLIYKLTKERTCAGLSLKSQELTAMFLGVRLYCSFVMEYDIHTLLDMATFGTTIWVIYMIRFKLNSSYMDDKDNLAIYYVVIPCAVLSLFIHPTTRHHAVNRIFWAFSVYLEAVSVLPQLRVMQNTKIIEPFTAHYVFALGVARFLSCAHWILQVLDTGGRLLTALGYGLWPPLVLLSEIVQTFILADFCYYYVKSLVGGQLVVRLPSGVV* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02293 272 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR 48 269 IPR000133 GO:0006621|GO:0016020|GO:0046923
Lapu9g02293 272 Pfam ER lumen protein retaining receptor 72 214 IPR000133 GO:0006621|GO:0016020|GO:0046923
Lapu9g02293 272 PRINTS ER lumen protein retaining receptor signature 188 202 IPR000133 GO:0006621|GO:0016020|GO:0046923
Lapu9g02293 272 PRINTS ER lumen protein retaining receptor signature 48 67 IPR000133 GO:0006621|GO:0016020|GO:0046923
Lapu9g02293 272 PRINTS ER lumen protein retaining receptor signature 202 220 IPR000133 GO:0006621|GO:0016020|GO:0046923
Lapu9g02293 272 PRINTS ER lumen protein retaining receptor signature 75 95 IPR000133 GO:0006621|GO:0016020|GO:0046923
Lapu9g02293 272 PRINTS ER lumen protein retaining receptor signature 166 186 IPR000133 GO:0006621|GO:0016020|GO:0046923
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02293 Lapu-Chr9 37544060 37548074 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02293 5 272 Miscellaneous Gene Families AT2G21190 76.119 5.06e-161 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02293 - K10949 gmx:100787747 505.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02293 9 37544060 37548074 Lapu9g02293 9 37544060 37548074 ECH