Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02288 ATGGGAGAAAAATCGAAGTCCAAAGGAGGGTGTTGCGGTTGGTTCATCGCGTTTGTCATTCTGGCTATCGTCGTCGGAGCTGTTGTTTTTACCGTTAAGAAGAAATTCGGTCACTCTGGTTCCGATAAAGCCGCTCCGGTTCCCGGTCCCCCTGGTGCCGTTGATCAAAAATACGCCACTGCACTAAAAACCTCATTGCAATTCTTCGATATTCAAAAATCTGGGAAGTTAGTCAACAACAAAATACCTTGGAGAGGGGATTCTGGTCTTAAGGATGGGAGCCAAGCGAAGCTGGACCTCTCAAAAGGAATGTATGATGCCGGAGATCACATAAAATTTGGTTTTCCGATGGCTTTTACGGCGACGGTGTTGTCGTGGGCCATTCTGGAATATGGAGATCAAATGGATCACGTTGGCCAGTTAGACTCGGCTCAAGATTCGCTCAAGTGGATCACTGATTATCTCATTAACGCTCACCCTTCTGCGGATGTTCTTTATATTCAGGTGGGTGATCCTGTTGCAGATCACAAGTGTTGGGAAAGACCAGAAGACATGACTGAGGCTCGACCACTCATACAAGTGAATGCATCTTATCCTGGATCAGACATTGCAGCTGAAACTGCAGCAGCCATGGCCTCAGCGTCTTTGGTCTTTAAAAAGACTGATTCTACGTATTCAAGCACACTCCTCAAGCATGCAAAACAGTTGTTTACTTTTGCTGACAAAAATAGGGGATATTATAGTGAGAGTATACCTGAAGTCCAGACATATTATAACTCAACTGGATACGGTGATGAGCTTTTATGGGCTGCTAGCTGGCTCTATCATGCTACAGGTGATGATTCTTACCTTCAGTTTGTGACTGGCCAAGATGGAGAAGACTATGCTGAATGGGGAAGCCCAACCTGGTTCAGTTGGGATAACAAGCTTGCTGGGACTCAGGTTTTGTTAGCTAGATTAAGCTTTTTTAAGGCAAAGGGCATTTCAAATTCGTATAGCTCTGGGCTCCAAAGTTACAGGCAAACGGCTGAGGCTGTTATGTGTGGCCTTCTTCCGGATTCTCCAACAGCCACAAAAAGCAGAACAGATGATGGTCTTATATGGGTGAGCGACTGGAACTCTTTGCAACATCCTGTTGCATCTGCATTCTTAGCTGCTGTTTACAGTGACTATATGCTAACATCGCAGACACCAAAACTAAAATGTAATTCAGATTCCTTTACCCCATCAGATCTTCGAGACTTTGCGAAATCTCAGGCTGATTACGTATTGGGCAAGAATCCTATGCATATGAGTTTTCTGGTGGGCTACGGAGATAAATTCCCGCAATTCGTGCATCATAGGGGTGCTTCAATTCCTGCTGATGCAAAAACTAGCTGCAAGGATGGCTTCCAGTGGCTTGAGTCATCTGATCCAAATCCCAATGTAGCTACTGGAGCACTTGTTGGTGGACCCTTCATGAATGAGACTTTCATTGATTCCAGGAACAATTCCATGCAAACAGAACCAAGCACGTACAACAGTGCTGTCATAGTTGGTCTCCTATCAAGTTTAGTCACAACGTCTTCTGCCGTTCAATCCTTTACCTAA 1590 0.4491 MGEKSKSKGGCCGWFIAFVILAIVVGAVVFTVKKKFGHSGSDKAAPVPGPPGAVDQKYATALKTSLQFFDIQKSGKLVNNKIPWRGDSGLKDGSQAKLDLSKGMYDAGDHIKFGFPMAFTATVLSWAILEYGDQMDHVGQLDSAQDSLKWITDYLINAHPSADVLYIQVGDPVADHKCWERPEDMTEARPLIQVNASYPGSDIAAETAAAMASASLVFKKTDSTYSSTLLKHAKQLFTFADKNRGYYSESIPEVQTYYNSTGYGDELLWAASWLYHATGDDSYLQFVTGQDGEDYAEWGSPTWFSWDNKLAGTQVLLARLSFFKAKGISNSYSSGLQSYRQTAEAVMCGLLPDSPTATKSRTDDGLIWVSDWNSLQHPVASAFLAAVYSDYMLTSQTPKLKCNSDSFTPSDLRDFAKSQADYVLGKNPMHMSFLVGYGDKFPQFVHHRGASIPADAKTSCKDGFQWLESSDPNPNVATGALVGGPFMNETFIDSRNNSMQTEPSTYNSAVIVGLLSSLVTTSSAVQSFT* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02288 529 FunFam Endoglucanase 54 523 - -
Lapu9g02288 529 SUPERFAMILY Six-hairpin glycosidases 56 521 IPR008928 GO:0005975
Lapu9g02288 529 PANTHER ENDO-1,4-BETA-GLUCANASE 27 520 - -
Lapu9g02288 529 Pfam Glycosyl hydrolase family 9 58 515 IPR001701 GO:0004553|GO:0005975
Lapu9g02288 529 Gene3D - 55 522 IPR012341 GO:0005975
Lapu9g02288 529 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 422 448 IPR018221 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02288 Lapu-Chr9 37490774 37497793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02288 1 528 Glycoside Hydrolase AT1G75680 70.510 0.0 713
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02288 - - gmx:100820195 993.801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02288 9 37490774 37497793 Lapu9g02288 9 37490774 37497793 ECH