Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02287 ATGGAATCTCAACAGCACCAACAATCCTCCACCAAGTCCAGGTTCAGACGCATCTGTGTTTACTGTGGTAGCAGCCCTGGCAAAAGCCCCAGCTACCAGCTCGCTGCTGTTCAACTCGGAAAACAACTGGTGGAGAGGAAGATTGACTTGGTTTATGGAGGAGGAAGCATAGGGTTGATGGGTCTAATCTCACAAGTTGTATATGATGGTGGACGCCACGTGTTAGGGGTCATTCCAAAGACACTTAATGCAAGAGAGATCACCGGAGAGAGTGTAGGAGAAGTGAGGGCTGTATCGGGCATGCACCAACGCAAGGCAGAGATGGCCCGACAAGCCGATGCATTCATTGCACTGCCAGGTGGATATGGCACCCTTGAAGAACTGTTGGAAATTATCACCTGGGCTCAGCTAGGTATCCATGATAAACCGAATTGGTTACAGGTGGGGTTGTTGAACGTGGATGGGTACTACAACTCGCTGCTGGCATTCATGGACAAAGCTGTGGACGAAGGTTTCGTAACACCTGCTGCCCGTCACATTATTGTTTCTGCCCAAACTGCCCAAGACCTCATGTGCAAACTTGAGGAATATGTCCCCGAGCACTGTGGCGTGGCCCCCAAGCTAAGTTGGGAGATGGAGCAACAGTTAGTTAACACTGCAAAGTCAGATATTTCCCGTTGA 681 0.5007 MESQQHQQSSTKSRFRRICVYCGSSPGKSPSYQLAAVQLGKQLVERKIDLVYGGGSIGLMGLISQVVYDGGRHVLGVIPKTLNAREITGESVGEVRAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEIITWAQLGIHDKPNWLQVGLLNVDGYYNSLLAFMDKAVDEGFVTPAARHIIVSAQTAQDLMCKLEEYVPEHCGVAPKLSWEMEQQLVNTAKSDISR* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02287 226 Pfam Possible lysine decarboxylase 60 193 IPR031100 -
Lapu9g02287 226 NCBIfam Rossman fold protein, TIGR00730 family 17 197 IPR005269 GO:0009691|GO:0016787
Lapu9g02287 226 Gene3D - 4 196 - -
Lapu9g02287 226 FunFam CASP-like protein 5 196 - -
Lapu9g02287 226 PANTHER LOG FAMILY PROTEIN YJL055W 9 216 - -
Lapu9g02287 226 SUPERFAMILY MCP/YpsA-like 14 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02287 Lapu-Chr9 37483783 37486587 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02287 K22522 - gmx:100782787 412.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02287 9 37483783 37486587 Lapu9g02287 9 37483783 37486587 ECH