Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02268 ATGGGAGCTCTGGCTACATTAGCCCCGTGGATTCCCGAGGACGATCTTTTGCTCAAGAACGCCGTTGAGGCTGGTGCTTCACTAGAGTCACTTGCCAAAGGTGCAGTGCAATTTTCTCGAAAATATAGTATCAGAGAGATACAGGATAGGTGGTATTCTCTCCTCTATGATCCTGTCATTTCTGCAGAAGCTTCTGCGGGTATGGCAAACTTTGAGCTTTCAGCTTCGCCTCTCCCATCGAAGTTCTACAAGTTTGGACATTCCAAAGAACAGAAAGTTGTTTCAGCTAAAAGAAAGTCTGAAAGTGTTCGCAATTTGTATTATGCAAGGCGCAAAAGAATTCGCAATAGCATGTTAACTTCCATGGACTTAAGTTTTCTAGTCGATCCGGAAAATGGTAATTATGCAGAGCATGAAAGTGGCCCCTTATCTGGAAACTGCATGCCTGAAGGTGGAACTTTAAATCCCCCTGCCCAGTATGATTTTCCTCCTGAAAGTGTGATGGATGGTAATGTAGCTTCTGTTGGACTTACTGCCAGTGTGTTTTTCCCTGGAGTTGACAGTGCAGTTGAAGAGAGTTTGCCTGCCAAGCTAAAGAACGTACTTAAGGAAGAACCTCAATTTATTGGAGACAATGTTCCTTTGGATGAAGCTGTTGAGGAATTGGATGTTCCTGGAGAATTGACCATTGATGGGTGGATTGGTGATGATAATTTAGAGAGAATGCCTTTGGCCACATTGGATCACATCAACAATGACCCTGGAAATATTTGTCCCGATTTTGACAAAAACAATGCATTTGATTCAACCGAGTTAGAGTGTGGAACACCATTTAACTTAGCTTCACTTCCTGAAATACCAGTCTGGGGTACAGATGAGGGCATCAAAGAATCTGATATGCCATGCGATGGTTTTAACGATTCTATTGCTTGTGGGGAGGCTTATTTGGAAGAACTATCCAATTCTCTCCTCAACTTCAGTAGTGAGGAAGAGCTGTTTCTGATGGATGTTGATGGGGAAGAAGGGATTGACAAATCTTACTTTGATGGTCTGAGTTCGCTCCTATTAAATTCTACAAATGATATTAATCCAAGTCAAGTCCCTAAAAAGGATGAAACAGAGTCGCAAGTCCCTAAAATGGATGGAACAGAGGCGTTAATGGCCTCACAGGCACATGTTATAAGTCAGTCAGTTTCATGTCCCAAAGAGGTAGAAGACAACCCAGGGTCAACCTCTAGTGGTGTACAAGTAGTTCACAAATTAGAGTTCCAAATGTCATCTCCCTTGGTTGAAGACCCCCTCTTTCATGAGCTAACTAATGAAGTTTCTTCCTGTTCCCTAAACACCGAGGAACATGAAATTCCAGATAATGAAGACGTTTTCCTACCTTTTGATGTGCCTCCTGTCATATTTCCCCCTTCATCTAAACTAATTTTTAAAGTATCCAAGAAACCAATTTCATCATCTGTTCAGGATTATGGATTTAATAAGCATAGAGCTAGTGAAAGAGGTAAAACTTTGATGCATGTAGAAAAGAAAATCCGTGTAGAATCTCAATCATCTTCTCAAATGATGGGATCTCCTTGCTTCCTGGGACCTGATGGTGGTTCTAAGGTAAAATGTGAGTTGCCTGCTAGTCATGCATCACACATAGTATCTACGAGTTGTGTTCCTGTTTCTGGTGGCTTAGGTGTTAATGATGCTGCAAACACTGCAAATGCTCTTCTGCGTGCAAATAAAAAGGAAGAAGCTAATGCTGGCTTGGCAAAGGATCCAAGCAATCATATGGCAAATCCTTTCATTAAGAAATCAGCCGCCAGTTCTAATGACTTACAAAATCATCCCCAACATCATGATTCTAGCATGAAAAATGAACATAATTTAGGTTTGCCAGCTCAAGATCACCAGTCGAAATGTGCTGAAGTGGGATCCTCAGATGTTCTCGAGTCAGAGCCGGTGGCAAATCCTCCAACATTAGATGAGGAAGAGCAATATATAGAGAGCGATGATGAGCTTCCTTCTTATTCTGATGTAGAAGCAATGGTACTTGATATGGACTTGGATCCTGATGATTATCAGGATTCTTCTTACAATGAGGAAGTATCAAGATATCAACATGTGGAAAGTAAGCGAGCTATCATGAGGCTGGAACAGGGTGCCCATTCTTGTATTCAGAGAGCCATTGATGCACATGGAGCATTTGCCATTTTATATGGTCGCCACTCAAAGCATTATATTAAGAAACCTGAGGTTCTACTTGGACGAGCGACAGAAGGTTTTGCTGTGGACATTGACTTGAGTAGAGGAGGGCACAGCAATTCAATATCTCGACGCCAGGCAATTATAAAGATGGATAAAGAGGGGTCATTCTACATAAAAAACTTCGGCAAGAGTTCTATCCTGGTAAATAGCAAAGAAGTGCTCACTGGTCAGTCTCAAAGACTGCATACCAATTTTCTAATTGAGGTGAGGGGCATACCTTTGATATTTGAGATAAATCAAAATCGTGTGAAGCGGTACCTGGATCACATTTCTGACAATTCACAAACCTTTTAG 2556 0.4159 MGALATLAPWIPEDDLLLKNAVEAGASLESLAKGAVQFSRKYSIREIQDRWYSLLYDPVISAEASAGMANFELSASPLPSKFYKFGHSKEQKVVSAKRKSESVRNLYYARRKRIRNSMLTSMDLSFLVDPENGNYAEHESGPLSGNCMPEGGTLNPPAQYDFPPESVMDGNVASVGLTASVFFPGVDSAVEESLPAKLKNVLKEEPQFIGDNVPLDEAVEELDVPGELTIDGWIGDDNLERMPLATLDHINNDPGNICPDFDKNNAFDSTELECGTPFNLASLPEIPVWGTDEGIKESDMPCDGFNDSIACGEAYLEELSNSLLNFSSEEELFLMDVDGEEGIDKSYFDGLSSLLLNSTNDINPSQVPKKDETESQVPKMDGTEALMASQAHVISQSVSCPKEVEDNPGSTSSGVQVVHKLEFQMSSPLVEDPLFHELTNEVSSCSLNTEEHEIPDNEDVFLPFDVPPVIFPPSSKLIFKVSKKPISSSVQDYGFNKHRASERGKTLMHVEKKIRVESQSSSQMMGSPCFLGPDGGSKVKCELPASHASHIVSTSCVPVSGGLGVNDAANTANALLRANKKEEANAGLAKDPSNHMANPFIKKSAASSNDLQNHPQHHDSSMKNEHNLGLPAQDHQSKCAEVGSSDVLESEPVANPPTLDEEEQYIESDDELPSYSDVEAMVLDMDLDPDDYQDSSYNEEVSRYQHVESKRAIMRLEQGAHSCIQRAIDAHGAFAILYGRHSKHYIKKPEVLLGRATEGFAVDIDLSRGGHSNSISRRQAIIKMDKEGSFYIKNFGKSSILVNSKEVLTGQSQRLHTNFLIEVRGIPLIFEINQNRVKRYLDHISDNSQTF* 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02268 851 MobiDBLite consensus disorder prediction 607 673 - -
Lapu9g02268 851 Pfam FHA domain 753 822 IPR000253 GO:0005515
Lapu9g02268 851 PANTHER MICROSPHERULE PROTEIN 1 7 849 IPR037912 GO:0002151|GO:0031011|GO:0071339
Lapu9g02268 851 Gene3D - 693 843 - -
Lapu9g02268 851 CDD FHA_MCRS1 729 833 - -
Lapu9g02268 851 SMART FHA_2 750 807 IPR000253 GO:0005515
Lapu9g02268 851 FunFam Microspherule protein 1 694 843 - -
Lapu9g02268 851 SUPERFAMILY SMAD/FHA domain 730 833 IPR008984 GO:0005515
Lapu9g02268 851 ProSiteProfiles Forkhead-associated (FHA) domain profile. 751 807 IPR000253 GO:0005515
Lapu9g02268 851 Pfam N-terminal region of micro-spherule protein 10 75 IPR025999 -
Lapu9g02268 851 Coils Coil 565 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02268 Lapu-Chr9 37253840 37260585 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02268 - - gmx:100786493 1244.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02268 9 37253840 37260585 Lapu9g02268 9 37253840 37260585 ECH