Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02235 ATGGCGGTGAAACCTGGGTTGCTAGTGGTTTTGTTCGTTCTGTATGTGACAGTGGAGCAGAGTAAGGTGCTCCAGGTGGAAGCAGATGATGGTGGTGGGTTTGTGAAAACAAGAGGAGTGCAGCTTATACTGAATGGAAGCCCCTACTATGCTAATGGCTTCAATGCCTATTGGCTGATGTACATTGCCTCTGATCCTTCTCAGAGAAACAAAGTCTCCTCGGCCTTTCAACAGGCTTCAAATCATGGACTCAACATAGCCAGAACTTGGGCTTTCAGTGATGGTGGTTATAAGCCCTTACAATACTCTCCTGGATCCTACAATGAACAAGTCTTCCAGGGATTGGATTTCGCAATAGCCGAAGCAAGAAAATACGGGATCAAGCTGGTTCTGAGTTTGGTGAATAACTATGAGAACATGGGTGGCAAGAAACAGTATGTAGAATGGGCAAGGAGTCAGGGACAGTCCATAAATTCTGAAGATGACTTTTTCACAAATCCTGTGGTGAAGGGATTCTATAAAAACCACATTAAGGCAGTACTAACAAGACGTAACAGCATCACTGGAATTGCTTACAAAGACGATCCAACTATAATGGCTTGGGAACTTATGAATGAGATTAGGTGCCCTTCTGATCAATCAGGAAAAACAGTTCAGGCTTGGATTTCTGAGATGGCATCTTACCTGAAATCCATGGATGGAAACCACTTGCTGGAAGCAGGTTTGGAGGGTTTCTACGGCCAGTCAAAGACTCAGTCCAATCCAAACTTCAATGTAGGAACCGATTTCATTGCAAACAACCAAATCCCTGGCATTGATTTCGCAACAGTGCACTCCTACCCGGACCAATGGTTATCGAGTTCAGGTTATGAAGAGCAAATCTCATTCTTGGGGCGGTGGGTGGATGAGCACATCCAAGATGCACAGAACACTCTTCACAAGCCAGTTCTCTTTGCGGAGTTCGGTATTTCCACAAAAAGCTTCGGTGGCAACTTATCACCAAGGGATCGGTTATTCAACACGGTATATTCTGCAATATACTCATCCGCAAGTAGTGGTGGTGCTGCTGTTGGCGGCATGTTTTGGCAGCTTCTAGCTCAAGGAATGGATTCTTTTCGAGATGGTTATGAGGTGATCTTAGATGAAAGCCCCTCAACAGCTACTTTGATCGCTCAACAGTCTCAAAAACTAAACCACATTCGCAAGATGTACGCCAGACTCCGAAACATTGAGAAGTGGAATAGAGCTAAGGAAATTAGAGGCTCACAATGGCATGTCGGTGGTAACGGTGGAAACTAA 1299 0.4488 MAVKPGLLVVLFVLYVTVEQSKVLQVEADDGGGFVKTRGVQLILNGSPYYANGFNAYWLMYIASDPSQRNKVSSAFQQASNHGLNIARTWAFSDGGYKPLQYSPGSYNEQVFQGLDFAIAEARKYGIKLVLSLVNNYENMGGKKQYVEWARSQGQSINSEDDFFTNPVVKGFYKNHIKAVLTRRNSITGIAYKDDPTIMAWELMNEIRCPSDQSGKTVQAWISEMASYLKSMDGNHLLEAGLEGFYGQSKTQSNPNFNVGTDFIANNQIPGIDFATVHSYPDQWLSSSGYEEQISFLGRWVDEHIQDAQNTLHKPVLFAEFGISTKSFGGNLSPRDRLFNTVYSAIYSSASSGGAAVGGMFWQLLAQGMDSFRDGYEVILDESPSTATLIAQQSQKLNHIRKMYARLRNIEKWNRAKEIRGSQWHVGGNGGN* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02235 432 SUPERFAMILY (Trans)glycosidases 34 389 IPR017853 -
Lapu9g02235 432 Pfam Cellulase (glycosyl hydrolase family 5) 51 327 IPR001547 GO:0004553|GO:0071704
Lapu9g02235 432 Gene3D Glycosidases 31 401 - -
Lapu9g02235 432 FunFam Mannan endo-1,4-beta-mannosidase 6 31 401 - -
Lapu9g02235 432 PANTHER - 7 419 IPR045053 GO:0004553
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02235 Lapu-Chr9 36973017 36976508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02235 8 417 Glycoside Hydrolase AT5G66460 65.060 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02235 K19355 - gmx:100794126 763.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02235 9 36973017 36976508 Lapu9g02235 9 36973017 36976508 ECH