Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02219 ATGCGAATTCCCAAGAGGCACCTCACCTTTTCTCTCTCCAATTTCTCTCCTCAACTAGCACCTCTTTTCTCTACTCGCCTTCGCTTCGCTTCTGGAATCTCCGCCAAACGCCCTCACTCCGTCGCCAACGCTACGTCACCAGGCTTAAATCTATCAGGAGTTAATCCGTTGCATGCTCAATATTCAATGGACGCAAACCATGAAATTGGTGTACATGAGTCAGGATTGGTGGGTTTGCCTGGCACTGATGGCGGCAAACAGCCACGAGTATGGTCATCTCCTGAACATGGATTTAAAACTGAAATAGGCAAGCAGATATTCTGTAATCGGTCGTTGAATATGAAGAACATTGTTGCTGTGGGATTTGACATGGATTATACTCTGGCACAGTACAAGCCAGAAACTTTTGAATCTCTTGCTTATCAAGGCACAATTAAAAAGCTGGTTTATGATTTGGGATACCCTCGTGAGTTACTAAATTGGTCTTTTAACTGGAAGTACATGGTCAGAGGCTTGGTTCTTGACAAAAAAAGAGGAAACATATTGAAGATGGATCGCCACAAGTATGTGAAAGTAGCCTATCATGGATTTAGAGAGTTGTCAAAGGAAGATAAAGTTGGAACCTATGGAAATACTTTAATACGTGATTCCTTTGATGAACCGGATTATGCTCTAATTGATACTCTCTTTTCACTTGCGGAGGCCTACCTGTTTGCTCAACTGGTGGATTTCAAGGATTGCAATCCTGGCAAGATTCAAGAGGGTGTTAGCTACGCTCACATGTACAAAGATGTTCGAGCAGCAGTTGATTTGTGCCACCGTGATGGAACATTGAAGCAAATGGTTGCTAAAGAACCGAAAAGGTATATTAATGATGACTCCTCAATAGTGCCCATGCTTGAAATGCTCAGAGACTCTGGTCGTGCTACATTTTTAGTGACAAATAGTTTATGGGACTATACAAACGTTGTCATGAATTTCCTCTGTGGATCCAGCATGGAAGATGTCAGTAACAATTTTTTCTGGCTTCAATACTTTGATGTTGTAATCACTGGCAGTGCAAAGCCGGGCTTTTTTCATGAGGAAAATCGTGCCAACCTATTTGAGGTTGTGCCTGAGACCGGAATGCTTCTCAATACAGATAATGGCTCTCCTATGCCCCAGGTGGGTAATACTACCTCAGCAAGGTTGTTCACAGAAGCAGAGAATCATGCTTGTCCAGTTTTCCAGGGAGGCAATGTTGCTCATCTGCATAAACTGCTTTCCATTGAATCTAGTTCGCAGGTTCTCTACGTTGGGGACCATATTTATGGAGATATATTACGCAGCAAAAAGGTTCTTGGTTGGAGAACAATGCTTGTAGTCCCAGAGCTTGAGAAGGAAGTTAAACTCCTCTGGGAATCTAGGGATACCCGCAAGGAACTTCAATTCTTGAGGAGTGAGCGTGACCGCATCGAGGATGAAATACATCATTTGAAGTGGTCTCTTAAATTCAAGAATCCAGGTGCTGATTCTAAGAAGAAGTTATCTTCAGAACTTGATACATTGGAGCTTGAGAGAGAGAGAGTGAGATTAAGGCATCAAGAAGCTCAGAGAAAATTACATCAAACGTTTCACGAGCCATGGGGTCAGCTTATGAAAACTGGTTACCAGAATTCTCGCTTTGCTCATCAGGTTGAAAGATTTGCTTGCCTGTATACTAGCCAAGTATCTAACCTGGGCTTGTACTCTCCAGACAAATATTACAGACCTAGTGAAGATTTTCTGCAGCATGAATTTGGCATTGTGGCTTATGAGACACCAGACATTTAA 1812 0.4255 MRIPKRHLTFSLSNFSPQLAPLFSTRLRFASGISAKRPHSVANATSPGLNLSGVNPLHAQYSMDANHEIGVHESGLVGLPGTDGGKQPRVWSSPEHGFKTEIGKQIFCNRSLNMKNIVAVGFDMDYTLAQYKPETFESLAYQGTIKKLVYDLGYPRELLNWSFNWKYMVRGLVLDKKRGNILKMDRHKYVKVAYHGFRELSKEDKVGTYGNTLIRDSFDEPDYALIDTLFSLAEAYLFAQLVDFKDCNPGKIQEGVSYAHMYKDVRAAVDLCHRDGTLKQMVAKEPKRYINDDSSIVPMLEMLRDSGRATFLVTNSLWDYTNVVMNFLCGSSMEDVSNNFFWLQYFDVVITGSAKPGFFHEENRANLFEVVPETGMLLNTDNGSPMPQVGNTTSARLFTEAENHACPVFQGGNVAHLHKLLSIESSSQVLYVGDHIYGDILRSKKVLGWRTMLVVPELEKEVKLLWESRDTRKELQFLRSERDRIEDEIHHLKWSLKFKNPGADSKKKLSSELDTLELERERVRLRHQEAQRKLHQTFHEPWGQLMKTGYQNSRFAHQVERFACLYTSQVSNLGLYSPDKYYRPSEDFLQHEFGIVAYETPDI* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02219 603 PIRSF NT5C2 86 601 IPR016695 -
Lapu9g02219 603 Gene3D - 102 151 IPR023214 -
Lapu9g02219 603 Gene3D - 267 484 IPR023214 -
Lapu9g02219 603 Coils Coil 506 533 - -
Lapu9g02219 603 CDD HAD_cN-II 107 568 - -
Lapu9g02219 603 Coils Coil 468 488 - -
Lapu9g02219 603 FunFam Cytosolic purine 5-nucleotidase 266 484 - -
Lapu9g02219 603 SUPERFAMILY HAD-like 104 594 IPR036412 -
Lapu9g02219 603 PANTHER 5'-NUCLEOTIDASE DOMAIN-CONTAINING 103 592 IPR008380 -
Lapu9g02219 603 Pfam 5' nucleotidase family 106 593 IPR008380 -
Lapu9g02219 603 NCBIfam HAD-IG family 5'-nucleotidase 106 475 IPR008380 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02219 Lapu-Chr9 36886245 36893101 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02219 - - vun:114164304 1134.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02219 9 36886245 36893101 Lapu9g02219 9 36886245 36893101 ECH