Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02216 ATGGCGGCGGAGATACCCTGCTGTGGAACAAAGTTCTCATTGTACGTGTTGGTCATCATAGGATTGGTCTGCTTCGCGGGCTTAATGGCTGGTCTCACTCTCGGACTCATGTCTCTCGGACTCGTCGACCTCGAAGTTCTCATGAAATCTGGTCGTCCTCAGGATCGAATTCACGCTTCGAAAATTTATCCAGTGGTTAAGAACCAGCATCTTCTGCTTTGCACGCTTCTAATTGGAAACTCCTTAGCCATGGAGGCTCTTCCCATTTTTCTGGATTCGCTGGTGCATCCTGCTGCTGCAATCTTGATTTCGGTCACTCTCATCCTCATGTTTGGAGAGATATTGCCGCAAGCAATTTGCACAAGATATGGACTGACGGTTGGAGCAACGCTGGCTCCATTTGTTCGTGTTCTTCTTCTTGTTTTCTACCCTGTTTCATATCCAATCAGCAAGGTTCTTGATTGGATGTTGGGTAAAGGACACGCTGCCCTTTTGAAGAGGGCAGAGCTTAAGACCTTCGTGAATTTTCATGGAAATGAGGCCGGTAAAGGAGGAGATTTAACCCATGACGAGACAACCATCATTACTGGAGCACTTGAATTGACAGAAAAGACTGCAAAAGATGCCATGACTCCCATATCAAAGGCATTTTCCCTTGATCTGGATGCAACTCTAAATTTGGAGACACTGAATTCAATAATGACAATTGGTCATAGTAGAGTTCCAGTTTATGCAGGAGAAAAAACTAATATTATTGGACTTGTTCTGGTGAAAAATCTCTTTATGGTTGATTCAAAGGCTGCAGTTCCTCTAAGAAAAATGGTCATCAGAAAAATTCCTCGTGTTTCAGAGAACATGCCTCTGTATGATATACTGAACGAATTTCAGAAGGGTCACAGTCATATTGCAGTAGTGTATAAGGATCTAAACAGTAAAAACGAGGCCCCCAAAAAGGTTAAAGATGGGGAACAACACGATCTCAAGGACAACTATAAGAATAAGGGAGAGAATGCACCCTTGGATAAAGGTTCTAAATTGGAGTCAGGAGATACTTTGACTACTGTTACTAAGATTGATGGTGCTCAACAAGCAAAGAAAAGCCCACCAGCTACTCCTGCTTTTAAAAAGCGACATAGAGGTTGTTCATATTGCATCCTGGACCTTGATAATGCACCGCTGCCAGTATTCCCACCCAATGAAGAGGTTGTTGGTGTTATTACAATGGAGGATGTCATCGAAGAGCTTCTTCAGGAGGAGATACTAGATGAAACTGATGAATATGTCAATATCCATAACAAGATAAAAGTTAACATGAATGCTTCAAAGGAAAAGGCTTCTGATGCAAATCTGTTGCAACCTTCTCAAGCGGTTCAAGGACACACACCAACTAATTCAATTTCTACAGCTACTTCTGAAACAGGCTCACCGACCACAATCGATCTAATCTCTGAAAGTGAGTCACTAAGGAATCTATAG 1476 0.4248 MAAEIPCCGTKFSLYVLVIIGLVCFAGLMAGLTLGLMSLGLVDLEVLMKSGRPQDRIHASKIYPVVKNQHLLLCTLLIGNSLAMEALPIFLDSLVHPAAAILISVTLILMFGEILPQAICTRYGLTVGATLAPFVRVLLLVFYPVSYPISKVLDWMLGKGHAALLKRAELKTFVNFHGNEAGKGGDLTHDETTIITGALELTEKTAKDAMTPISKAFSLDLDATLNLETLNSIMTIGHSRVPVYAGEKTNIIGLVLVKNLFMVDSKAAVPLRKMVIRKIPRVSENMPLYDILNEFQKGHSHIAVVYKDLNSKNEAPKKVKDGEQHDLKDNYKNKGENAPLDKGSKLESGDTLTTVTKIDGAQQAKKSPPATPAFKKRHRGCSYCILDLDNAPLPVFPPNEEVVGVITMEDVIEELLQEEILDETDEYVNIHNKIKVNMNASKEKASDANLLQPSQAVQGHTPTNSISTATSETGSPTTIDLISESESLRNL* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02216 491 MobiDBLite consensus disorder prediction 454 477 - -
Lapu9g02216 491 FunFam DUF21 domain-containing protein 189 324 - -
Lapu9g02216 491 Gene3D - 374 423 IPR046342 -
Lapu9g02216 491 Gene3D - 189 323 IPR046342 -
Lapu9g02216 491 MobiDBLite consensus disorder prediction 315 348 - -
Lapu9g02216 491 CDD CBS_pair_CorC_HlyC_assoc 205 306 IPR044751 -
Lapu9g02216 491 MobiDBLite consensus disorder prediction 315 343 - -
Lapu9g02216 491 PANTHER METAL TRANSPORTER CNNM 3 454 IPR045095 GO:0010960
Lapu9g02216 491 Pfam Cyclin M transmembrane N-terminal domain 18 189 IPR002550 -
Lapu9g02216 491 ProSiteProfiles CNNM transmembrane domain profile. 8 191 IPR002550 -
Lapu9g02216 491 SUPERFAMILY CBS-domain pair 195 417 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02216 Lapu-Chr9 36866522 36870879 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02216 K16302 - gmx:100804572 872.078
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02216 9 36866522 36870879 Lapu9g02216 9 36866522 36870879 ECH