Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02178 ATGGGGGCGGAGTCGCAAATTCCCCAAAGCTTAATCCACAGAATCTACGCACCCTTGGCTAACGAATTTCATTTTGCACCACCACTCTCTTCCTCCAGAACAAATGAACTCGAACTCGTTCGAGGTGTTCTACGCATGCTGCAAGGGTTTTCTGGCCCCTTTTTCTCTTGGGATAAAAGTGCAAACGGTTTCCGTGCAAAGAGCGGAGTTTACGTCAGCCATCTCTCACAGAAAAGTCTCCACTCTCTTCTCAACCAGTTTATCCACGCAGCTACGTGTCTCCAATTCGTGGCGATTACACTCGATAAAGTTGAATCTGCAGTGCCAAAGTCTCCTCCTACTTTGAACGCGTTTGCGTCATCTGCTTCAGCGTGCCTTAAGCGGTTACGGAATCTTGCCTTGAAGGAGGAGACGTCCACGAGCAATGCAGATGGAATAAACACTCCAACCTTGTTAGGATTGACCAATTCCTTATCGAGTCTTTGCTCAGGCGCTGAGTTCCTATTTCAAGTGGTGCATGAGGCCATTCCTGCTGTATACTTTGAGTTTGGTGTGTCTGTACCAGCAGCAGAACTCACTGTTCACGTGCTTGACTATCTTCATAAGAAGCTTGATGAAATGTGTCTTGTACAAGGTGGTGAGGAGGAAGCTAATCAGATGGTGCTTTATATGTATGTTGGAAGCTTGTTGCCATATATCGAGGGTCTGGATTCCTGGCTTTTTGAAGGAATTCTTGATGATCCTTTTGGTGAGATGTTCTTTTTCACTAATAAAGAAGTCTCAGTTGATGAGACTGATTTCTGGGAGAAGAGTTATTTATTAAGAATACTACAGCATAGCAAGTTACGTTCAGAATTCTCTTCCACAAATTATGTCAATGATTCTGTGCCAGCATCAAATGACAAGGAAATGGACAGGAGGGATTCCATCTCTTTGTCTGGTACAATTAAAGGAAAAGAGCCAAGCATTAGAGACAGTCCAGCTTGTCCTTTTTTTATTAATGATTTGGCTAAATCAATAGTTTCTGCTGGAAAATCTTTGCAGCTAATGCGCCATGTACCTAATTCCTCAGTGAATTGTGGCAAAGAAAGTAATTATGAGGTTGGAAGTACCAAATGTTTAAACTATGGTTTATATCCTTCTCAGAGGATGGCTGGGCTAACCTTGCCGGAAGTTTTTTCTGTATCACTAGTTGGACTTGTCGGGCACGGTGACCATGTCTGGAAGTACTTTTGGCAGGAGAACTGGAACAAATTTGCGACTGTTTCTTCCTATGCATCATTTGTAAATGAGGAAAAAGTAGATAACGACGATAATGAAAAATTAATTGCTCCACCTTATTCCGAGAAGACATGGTATAAGTTCTTGATTGATACATTATTTCAGAAAAGATCAGCTGACTTGAAGCTAAAATATGAAGACATAAATAATGACACATTAGAGCTGAGAGGGGCTAGAGTTATTGAAGATGAAGTGCTTCTCTCGAGGTCATATGTGGAAAATCCAGTTATTACAGTATGTGGATCAAACCTTGCAAAGAATGGGAATGCCTTGAAAGCATTGAATTTATCTAAAAAATTCAGCTTGCCTTCATTAAATGACAAGAGTTTAAGAACGGCTATATTTGGTGCAGAAAGTACAGCATTTTCTGATAGTGAAGGAACGAACTATACTTTTGGCTTTCACTTTGGTGAATCTGAATACCTTCGCTCACAGGAAGACAGACAGCTGTTGGAAATGTTGTTTCCATTTCCCACTATTTTACCTTCATTTCAGGATGATGTTCCTGTGTCAGAGCTCTTACCTTTCCAGAGAAACAGCAGTCTTATTTCAAGAGTTCTTCGATGGATGCAAAATGTTGACCTAAGAACTACTCCACTTCCTTTAGTTATTATGCAGTACTGTCTAACCGTCTACATTCAGAAACAGGTGGATTATATTGGGGTGAATATGTTGTTAAAGTTGATGAATGAATGGAGATTGATGGATGAGCTTGCAGTGTTGCGAGCTATATACTTGCTAGGTTCAGGCGATTTGCTGCAACACTTTTTGACTGTAATTTTCAATAAGTTAGATAAGGGTGAAGCATGGGATGATGATTTTGAATTAAACACAATATTGCAGGAATCAATCAGAAATTCTTCTGATTGTATGCTGTTAAGAGCCCCAGATTCATTGGTAGTGTCGATAACCAAAAGTCGTGTCGACAGTGATGAGGAAACTAGCACAGCTGGTGCAGTTTTGAGCACTTCTCGTCAAAGTAATGTCAGCTTTGGAATTAATGGCCTTGATATGCTCAAATTCACGTATAAGGTCCCTTGGCCTCTTGAACTCATTGCAAATACAGAGGCAATTAAGAAGTACAACCAGGTGATGCTGTTCTTGTTGAAGGTCAAGCGTGCAAAATATGTATTAGATAAAGTGCGAAGATGGATGTGGAAGGGTAGGGGATCTGCTACAAATTATAGAAAGCATCATTGGTTAGTGGAGCAGAAACTCCTTCATTTTGTGGATGCTTTTCACCAATATGTGATGGATCGGGTATATCACAGTGCATGGCGTGAACTATGTGAAGGTATGACTGCAGCAAAATCTCTGGATGAAGTCATTGAAGTCCATGAGGCTTACATGTTATCAATTCAGCGGCAATGCTTTGTGGTTCCTGATAAGCTGGGGGCTCTTATTGCCAGCCGCATCAACAGCATCCTTGGCATAGCTTTAGACTTTTATAACATACAGCAGACATTAAGTAGCGGTGGAGCTGTTTCTGCAATCAAAGCAAGGTGTGAGATGGAAGTGGATCGGATAGAGAAACAGTTTGATGATTGCATTGCTTTCTTACTTAGGGTTTTATCATTTAAATTAAATGTGGGACACTTCCCTCATCTGGCTGATTTGGTGACCAGAATCAACTACAACTATTTCTACATGTCTGCTAATGGAAATTTGATGACTGCCTCCAGTTCTGGAAGTGTTACTTCGAGGTTGGGGAAGGCCCCTGCGTAG 3006 0.4112 MGAESQIPQSLIHRIYAPLANEFHFAPPLSSSRTNELELVRGVLRMLQGFSGPFFSWDKSANGFRAKSGVYVSHLSQKSLHSLLNQFIHAATCLQFVAITLDKVESAVPKSPPTLNAFASSASACLKRLRNLALKEETSTSNADGINTPTLLGLTNSLSSLCSGAEFLFQVVHEAIPAVYFEFGVSVPAAELTVHVLDYLHKKLDEMCLVQGGEEEANQMVLYMYVGSLLPYIEGLDSWLFEGILDDPFGEMFFFTNKEVSVDETDFWEKSYLLRILQHSKLRSEFSSTNYVNDSVPASNDKEMDRRDSISLSGTIKGKEPSIRDSPACPFFINDLAKSIVSAGKSLQLMRHVPNSSVNCGKESNYEVGSTKCLNYGLYPSQRMAGLTLPEVFSVSLVGLVGHGDHVWKYFWQENWNKFATVSSYASFVNEEKVDNDDNEKLIAPPYSEKTWYKFLIDTLFQKRSADLKLKYEDINNDTLELRGARVIEDEVLLSRSYVENPVITVCGSNLAKNGNALKALNLSKKFSLPSLNDKSLRTAIFGAESTAFSDSEGTNYTFGFHFGESEYLRSQEDRQLLEMLFPFPTILPSFQDDVPVSELLPFQRNSSLISRVLRWMQNVDLRTTPLPLVIMQYCLTVYIQKQVDYIGVNMLLKLMNEWRLMDELAVLRAIYLLGSGDLLQHFLTVIFNKLDKGEAWDDDFELNTILQESIRNSSDCMLLRAPDSLVVSITKSRVDSDEETSTAGAVLSTSRQSNVSFGINGLDMLKFTYKVPWPLELIANTEAIKKYNQVMLFLLKVKRAKYVLDKVRRWMWKGRGSATNYRKHHWLVEQKLLHFVDAFHQYVMDRVYHSAWRELCEGMTAAKSLDEVIEVHEAYMLSIQRQCFVVPDKLGALIASRINSILGIALDFYNIQQTLSSGGAVSAIKARCEMEVDRIEKQFDDCIAFLLRVLSFKLNVGHFPHLADLVTRINYNYFYMSANGNLMTASSSGSVTSRLGKAPA* 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02178 1001 PANTHER GAMMA TUBULIN COMPLEX PROTEIN 31 976 IPR007259 GO:0000226|GO:0000922|GO:0005815|GO:0007020|GO:0043015
Lapu9g02178 1001 Gene3D - 661 975 IPR042241 -
Lapu9g02178 1001 Pfam Gamma tubulin complex component N-terminal 40 365 IPR041470 -
Lapu9g02178 1001 FunFam Gamma-tubulin complex component 661 975 - -
Lapu9g02178 1001 Pfam Gamma tubulin complex component C-terminal 661 976 IPR040457 GO:0043015
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02178 2 708 Glycosyltransferase AT1G20570 47.989 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02178 K16572 - gmx:100782299 1793.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02178 9 36508324 36515853 Lapu9g02178 9 36508324 36515853 ECH