Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02172 ATGGCACAGTTTTCTCTCTCCCCTCTCTCCTTTCCACCTTCTTCCCTCCCACTGCGACGGCCAATCTTTCTCGCTCCTCCACCAACAACCGCTGCCTCTTCCGCCACCGACGCCGTTTCCACGTCCACTTCCTCTTCCTCTTCCTCTTCCAATTACGCGCCCAAAGTCGTCGTCACCAGAGAGCGTGGCAAGAACGCCAAGCTTATCGCCGCTCTGGCTAAACATGAAATCAATTGTTTGGAGCTTCCACTCATTGAGCACACGCAGGGACCTGATTTAGACAGGCTTCCTTCTGTATTAGGTGACAATGCATTTGACTGGGTTGTCATAACTTCTCCTGAGGCAGGTTCAGTCTTTCTAGAGGCATGGAGAGCTTCCGGGATGCCTCACGTCAAAATAGGTGTTGTTGGGACTGGCACTGCAAGCATTTTCAAGGAAACTTTGCAGTCTTCAAACCGATCCCTTGATATTGCCTTTGTGCCATCAAGAGCAACAGGAAAGGTTTTGGCTACTGAGCTTCCCAAGATTGGAAACAAATGCACCGTTCTCTATCCTGCTTCTGCAAAGGCTGGCAATGAGATTGAGGATGGACTTTCAAACCGTGGATTTGAGGTTACTAGAATGAATACATATACAACGGTGCCAGTTCAACATGTTGACCATATGGTTCTAAAGCTAGCACACGAGGCCCCCGTTCTTACAGTAGCTTCCCCATCTGCTGTTCGTGCCTGGAAGAATCTTCTTTCAGATTTAGAGTGGAACAATTCTGTTGCATGCATTGGTGAGACAACTGCTACAATGGCAAGAAGTTTAGGCTTCACAAATGTGTTCCACCCAACACAACCAGGTCTCGAAGGCTGGGTAGAAAGCATTATGGAAGCATTAGGTTCCTTTGATGAATTATTAAGGTAG 912 0.4792 MAQFSLSPLSFPPSSLPLRRPIFLAPPPTTAASSATDAVSTSTSSSSSSSNYAPKVVVTRERGKNAKLIAALAKHEINCLELPLIEHTQGPDLDRLPSVLGDNAFDWVVITSPEAGSVFLEAWRASGMPHVKIGVVGTGTASIFKETLQSSNRSLDIAFVPSRATGKVLATELPKIGNKCTVLYPASAKAGNEIEDGLSNRGFEVTRMNTYTTVPVQHVDHMVLKLAHEAPVLTVASPSAVRAWKNLLSDLEWNNSVACIGETTATMARSLGFTNVFHPTQPGLEGWVESIMEALGSFDELLR* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02172 303 SUPERFAMILY HemD-like 55 296 IPR036108 GO:0004852|GO:0033014
Lapu9g02172 303 Gene3D - 206 294 IPR036108 GO:0004852|GO:0033014
Lapu9g02172 303 MobiDBLite consensus disorder prediction 29 54 - -
Lapu9g02172 303 CDD HemD 56 291 IPR003754 GO:0004852|GO:0033014
Lapu9g02172 303 Gene3D - 100 205 IPR036108 GO:0004852|GO:0033014
Lapu9g02172 303 Pfam Uroporphyrinogen-III synthase HemD 68 289 IPR003754 GO:0004852|GO:0033014
Lapu9g02172 303 PANTHER UROPORPHYRINOGEN-III SYNTHASE, CHLOROPLASTIC 20 296 IPR039793 GO:0004852|GO:0006780
Lapu9g02172 303 FunFam Uroporphyrinogen-III synthase, chloroplastic 99 205 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02172 K01719 - gmx:100808086 477.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02172 9 36449928 36458886 Lapu9g02172 9 36449928 36458886 ECH