Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02168 ATGGAGAGAACAAAGTCATCCCTTCTGCAGATTCAGCCTCCAACATATGGAAACTTAGTCACAATTCTCAGCATCGATGGAGGTGGCATCAGGGGCATTATCCCCGCAACCATTCTTGCGTTCCTCGAAGCACAACTTCAGGATTTTGACGGTGAGGATGCAAGGCTTGCAGACTATTTTGATGTGATTGCAGGAACAAGCACAGGTGGTCTTGTAACCGCCATGTTAACTGCTCCAAATGATCATCAGCGTCCATTATTTGCTGCCAAAGATATTAAGCCCTTTTACTTGGATCACTGTCCAAAGATTTTCCCACAACGCAGTGGCGTGTGGGGATGGATAGAAAAGATGTGGAGATCATTAGGAGGACCAAAATACGATGGAAAATACCTTAAAGAAGTGGCGAGGGAGAAGCTAGGGGAGTCACGTTTGCATGAAACGCTGACCAATATTGTGATTCCCACCTTTGATATCAAGGCATTGCAGCCAACCATTTTCTCCTCTTATCAAATCAAGAGGTCTCCTTATTTGGATGCTCCACTCTCTGACATATGCATCAGCACTTCTGCTGCACCAACTTATCTTCCACCCTACCACTTCAAGAACAAAGATTCAAATGGGAACATGCACGAATTCAACCTTATTGATGGTGGCGTTTGTGCCAATAATCCGAGTTTGGTGGCCATAAATCAGGTAACGAAGCAGATCATTAATGAAAATCCTGACTTCTTTTCCATCAAGCCAATGGAATATGGTCGTTTCCTGATAATCTCTCTGGGCACTGGGACTCCCAAGAATGAACACAAATTCAATGCTCAAATGGCAGCAAAATGGGGTCTACTCGATTGGTTAACCAGCAGTGGTTCTACTCCCTTGATCGATGTTTTGACTCACTCCAGTGCAGATATGGTTGATTTCCATCTTGCTACTGTCACCCAAGCTTTTCATTCAGAAAATAATTACCTTCGTATACAGGATGATACATTGATGGGTAAAGATTCTTCACTTGATATTGCTACTAAAGAAAATATGGAAAAACTTAGCCAAATTGGTGAGAGGCTGTTGAAGAAACCAGTTTCTCAGATCAATTTGGAGACTGGTCTGTTTGAACTGTTGGGAAATGGGGAGACCAATGAAGATGCTCTCAGAAGGTTTGCGAAAATGCTTTCGGAAGAGAGGAGGTTCAGAGAATTGAAATCCCCTCTCACTAACAAAAGTTCCTAA 1224 0.4297 MERTKSSLLQIQPPTYGNLVTILSIDGGGIRGIIPATILAFLEAQLQDFDGEDARLADYFDVIAGTSTGGLVTAMLTAPNDHQRPLFAAKDIKPFYLDHCPKIFPQRSGVWGWIEKMWRSLGGPKYDGKYLKEVAREKLGESRLHETLTNIVIPTFDIKALQPTIFSSYQIKRSPYLDAPLSDICISTSAAPTYLPPYHFKNKDSNGNMHEFNLIDGGVCANNPSLVAINQVTKQIINENPDFFSIKPMEYGRFLIISLGTGTPKNEHKFNAQMAAKWGLLDWLTSSGSTPLIDVLTHSSADMVDFHLATVTQAFHSENNYLRIQDDTLMGKDSSLDIATKENMEKLSQIGERLLKKPVSQINLETGLFELLGNGETNEDALRRFAKMLSEERRFRELKSPLTNKSS* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02168 407 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 23 229 IPR002641 GO:0006629
Lapu9g02168 407 Pfam Patatin-like phospholipase 23 229 IPR002641 GO:0006629
Lapu9g02168 407 CDD Pat17_isozyme_like 17 367 - -
Lapu9g02168 407 FunFam Patatin 12 401 - -
Lapu9g02168 407 Gene3D Cytosolic phospholipase A2 catalytic domain 10 401 - -
Lapu9g02168 407 PANTHER XYLOSE ISOMERASE 6 397 - -
Lapu9g02168 407 SUPERFAMILY FabD/lysophospholipase-like 18 373 IPR016035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02168 Lapu-Chr9 36417530 36421311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02168 1 401 Miscellaneous Gene Families AT2G26560 62.344 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02168 - - gmx:100783909 719.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02168 9 36417530 36421311 Lapu9g02168 9 36417530 36421311 ECH