Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02096 ATGTCGAATCGATCCGGTCAGGATAGACAAGACAACAATAACAAGGGTTTCACCAAAACCCATAACCACAAGAAATTTGTCCCCAAAAATCCCAATCCAACCCTCTCAACCTCCCTCAGACAAACCCAACCACCCGTCCCCGCCACCACTAGCGGACCCCCAAACAGAGTCCAGGATGGGATTTTCGTTAAATACTTACCACAAGACGAGGCCGTGGCGGCGGGTCTTGGCGCCGAAGATGGAGCATTGGATCCCCTCGAATCTCAGAGAGTCGTAGATCTTTTGAACACACACTTGTCACGCTTGCTCAAGTGCAAACCCAAGCAATTCTGGACACAAGTGGCTGCTGACACCTCCCTTCATGAGTTTTTGGACAGCTTCTTGCAATTCAGAAGCAGGTGGTATGATTTCCCTCATCGAGGGGTGAAAGGGATTGTTGCAGGTGTTATTGTTGGAGAGCGCGATTTGAGTCGCCGCGTTTTCATGGTATTGTATCGCATTTCTTCGAATAAAGACCCTGGTGCTCGACCCGCCGATGCCCTCAGTTTGAGAGACCATGGAGTTCTTTTGCAGGAGAAAAAGTTGCTTGAATTGCCGAAGTTATTGGATATATGTGCCATATACTATCATGAAAATGAAGAACTGACAAGATCACTGGTCAGAAATGCCTTAAATGCTCAACCTTGGATCTATAACAATCTAACTGCAGTAATATCCCACTTTCTAGGAATTGTCAGCACAATGCACGAACGTTGTAGTTCATCATTGGAGGTTTTATTTTCTTCTGGAAATCTCGATCACCACAATGCTGCTTTTCTTCAAGCTGATCTGCTGGAGGTGATGGACTTTATAAATGATGCAATTGTATCAATGGATTCTTTTGTTAGTGCATACGAACCAGCAGCTGTATTCTTTTCTTGTCCAGTTGAAATGAGTTATGGGAATGAGGAACTGCTGAGCCTCCTTGCCAGATTGCATGATTCACTGATTCCATCATTGCAAAAGGGATTCCATATGATTTTTTCCGGCAAACATGATGGCACAACATCTAATATCTTGGTTAGTCTGAAGATGTTAAAAATAAGATTGGTAAAGTTTGGTTGGCAACTATTGCACTTGTGCTATCTAAGTGATGAAGTGTTCAGAGATAGCATCTCTCTTCCAGCTGCCACTAAGATGTTTCCTGCCAATGTAGAGGACCCTGTCATCAGAGCAGATATTCTGGTTCAAACATTTCGAGATATCAATTCGGTATCATCACATTCTCGGGAAAGCCATCAGAAGGAAACATTTGTTCAAGATGTTGAAAGAAATTTCAATATACTAAGTAGGATTGAGAGATTAAAGGATAGTGGATGGATATTCATTGACGATGAACAGTTTCAATATCTATCCGGGATGATGAGTTCTGTGAAAGAGATTTATAAGGACCCATATTCTGCAACAGCCCCTGTGCCAAACCAATCATTGCTGACGGATGAAGATGCTGCAATTGCAGAGTCGAACATCAGTCAAATTAGGGACCTATTCCCTGATTACGGTAAAGGATTTTTAGCTGCGTGTCTTGAGGTTTATGACCAGAATCCGGAAGAGGTTATTCAAAGAATTTTAGAGGGAACCCTCCATGAAGATCTGCAGAACCTGGACACCTCGCTAGAGACATTGCCACCAGCCAAGCCTACCGCCGTGGGTGGGAATGATAAAGGAAAAGGTAAATTAATTGATTCTACGTCAGCATCCTCAAATCCAGAAGTTGTCAGGGGGAAGCAACAGACAGAGGGGTCATTGATGTCATCCTCTGCTTCACTAGGAAAATTTGTAAGGAAATCTAAAGCTGACTTGCCTGATCTCAGTATTCTGGATAAAAAGGACGAGAAAGATACATCAAAAACTGCAGCTATGATTTTACAATATGAATATGAAGATGAATATGACGATTCTTTTGATGACTTGGGTTTAAGTGTAGCAGACTCTGGATTAGAAGAAAATGAGACACTTGGTGACCAAATAAATGCAAAATCAGGGAAATCGTGGGCAACAGAGAGTGGAAACTCGGTAAAAGATGTCTCTGATTCAAAATGGGGCTCCAGGAGAAAGCCACAGTACTATGTCAAGGATGGTAAGAATTACAGCTACAAAGTGGCTGGTGCGGTAGCAGTTGCAAATTCTGGTGAAGCTTCACTAGTAACTCAAGCTCAGAAAGAGTTAATACATGGCCTTGGACGAGGCGGAAACCTTCCTCTTGGTGCAGTAAAGAAGTTGACAGATTCCTACAAGGAGGATGACAACCAATTCCAGGTTTCGGAAATGGAAGGGAGAGGGACTCCGGGCAATTCTTTTGGTAGGGGTAGGAAGGAAGGTGGAAGACAGATTGCATCTCATCAGCAGCCGGTGCAACAATCTGATGATTCTGAGGTGGATGGGAATAACCAAAGGGGTAGAGGAAGAGGGAGAGGGAGGGGTAGAGGAGGAGGAAGAAACAATCACCACCAGAAGGACCGATCCATGAAGAAGCATTTCTCTGGATTGAGCGGTTATTAA 2541 0.436 MSNRSGQDRQDNNNKGFTKTHNHKKFVPKNPNPTLSTSLRQTQPPVPATTSGPPNRVQDGIFVKYLPQDEAVAAGLGAEDGALDPLESQRVVDLLNTHLSRLLKCKPKQFWTQVAADTSLHEFLDSFLQFRSRWYDFPHRGVKGIVAGVIVGERDLSRRVFMVLYRISSNKDPGARPADALSLRDHGVLLQEKKLLELPKLLDICAIYYHENEELTRSLVRNALNAQPWIYNNLTAVISHFLGIVSTMHERCSSSLEVLFSSGNLDHHNAAFLQADLLEVMDFINDAIVSMDSFVSAYEPAAVFFSCPVEMSYGNEELLSLLARLHDSLIPSLQKGFHMIFSGKHDGTTSNILVSLKMLKIRLVKFGWQLLHLCYLSDEVFRDSISLPAATKMFPANVEDPVIRADILVQTFRDINSVSSHSRESHQKETFVQDVERNFNILSRIERLKDSGWIFIDDEQFQYLSGMMSSVKEIYKDPYSATAPVPNQSLLTDEDAAIAESNISQIRDLFPDYGKGFLAACLEVYDQNPEEVIQRILEGTLHEDLQNLDTSLETLPPAKPTAVGGNDKGKGKLIDSTSASSNPEVVRGKQQTEGSLMSSSASLGKFVRKSKADLPDLSILDKKDEKDTSKTAAMILQYEYEDEYDDSFDDLGLSVADSGLEENETLGDQINAKSGKSWATESGNSVKDVSDSKWGSRRKPQYYVKDGKNYSYKVAGAVAVANSGEASLVTQAQKELIHGLGRGGNLPLGAVKKLTDSYKEDDNQFQVSEMEGRGTPGNSFGRGRKEGGRQIASHQQPVQQSDDSEVDGNNQRGRGRGRGRGRGGGRNNHHQKDRSMKKHFSGLSGY* 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02096 846 CDD CUE_ASCC2 500 539 IPR041800 -
Lapu9g02096 846 MobiDBLite consensus disorder prediction 764 846 - -
Lapu9g02096 846 MobiDBLite consensus disorder prediction 573 597 - -
Lapu9g02096 846 MobiDBLite consensus disorder prediction 673 694 - -
Lapu9g02096 846 Pfam CUE domain 500 540 IPR003892 GO:0043130
Lapu9g02096 846 Gene3D - 499 541 - -
Lapu9g02096 846 SUPERFAMILY UBA-like 499 555 IPR009060 GO:0005515
Lapu9g02096 846 MobiDBLite consensus disorder prediction 815 836 - -
Lapu9g02096 846 ProSiteProfiles CUE domain profile. 498 541 IPR003892 GO:0043130
Lapu9g02096 846 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 11 845 - -
Lapu9g02096 846 SMART cue_7 498 540 IPR003892 GO:0043130
Lapu9g02096 846 MobiDBLite consensus disorder prediction 673 690 - -
Lapu9g02096 846 MobiDBLite consensus disorder prediction 1 55 - -
Lapu9g02096 846 MobiDBLite consensus disorder prediction 792 806 - -
Lapu9g02096 846 MobiDBLite consensus disorder prediction 555 597 - -
Lapu9g02096 846 MobiDBLite consensus disorder prediction 27 55 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02096 K18667 - gmx:100778129 1414.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02096 9 35736936 35743799 Lapu9g02096 9 35736936 35743799 ECH