Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02030 ATGCAAGGCATAGGAATAGGGTGCTGCTCAAACGACGAGGAGGTGGTGGTAGGACAGGCGGAGCTAAGTCCGACCATGAGCAACTCCTCTTCACTGTCCATGGACCTGGACGAGTCCACCGAGACTCGGATCCAACGCCTCATATCAGAGCATCCAGTTATCATCTTCACCCGATCCTCCTGCTGCATGTGTCATGTTATGAAGAAGCTCCTAGCCACCATCGGCGTCCACCCCACTGTCATCGAATTAGATGACCATGAGATCGCTGCCCTTCCCCTCCCCGACACCACCGCCCCTGCGGCTTTCATCGGTGGTACCTGCATAGGCGGTCTTGAATCCCTCGTCGCCCTCCACGTCAGTGGTCACCTCATCCCCAAACTCGTTCAAGTCGGTGCTCTCTGGGTATGA 408 0.5637 MQGIGIGCCSNDEEVVVGQAELSPTMSNSSSLSMDLDESTETRIQRLISEHPVIIFTRSSCCMCHVMKKLLATIGVHPTVIELDDHEIAALPLPDTTAPAAFIGGTCIGGLESLVALHVSGHLIPKLVQVGALWV* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02030 135 ProSiteProfiles Glutaredoxin domain profile. 41 134 - -
Lapu9g02030 135 CDD GRX_GRXh_1_2_like 52 126 - -
Lapu9g02030 135 Gene3D Glutaredoxin 34 134 - -
Lapu9g02030 135 NCBIfam glutaredoxin-like family 44 135 IPR011905 -
Lapu9g02030 135 PANTHER GLUTAREDOXIN 43 134 IPR011905 -
Lapu9g02030 135 Pfam Glutaredoxin 53 107 IPR002109 -
Lapu9g02030 135 SUPERFAMILY Thioredoxin-like 40 134 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02030 Lapu-Chr9 35089531 35090360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02030 43 135 Miscellaneous Gene Families AT4G15660 41.584 2.29e-23 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02030 - K03676 gmx:100791969 229.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g00747 8 25525032 25527029 Lapu9g02030 9 35089531 35090360 PCT