Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02026 ATGTCAATGGATTCTTCTCAAGGGTCTACCATTGCTGGTTTCGTGGACAATGCTTCCATTCAGAGGAAACAGTCTAGTTTTGATGGCGTTCCTGTGTATGTCAAGGAGCTCATTGCTGGAGGCTTTGCTGGTGCGCTTTCTAAGACCACTGTTGCACCTCTTGAACGAGTCAAGATACTTTGGCAGACAAGGACACCAGGATTTCATTCTCTTGGGGTGTATCAATCTTTGAATAAATTACTAAAGCGTGAAGGGTTTCAAGGATTATACAAGGGAAACGGAGCTGGTGTTATCCGCATTGTTCCATATGCAGCCTTGCATTTTATGACATATGAGCGCTACAAAAGTTGGATCTTGAATAATTATCCAGTGTTAGGTTCGGGTCCTTTCATTGATCTTTTAGCAGGCTCTGCTGCAGGGGGAACTTCAGTTTTATGTACCTACCCGTTGGATCTTGCTCGTACCAAACTTGCTTACCAGGTGGTGGACACTAGAGGAGGTATCAAAGATGGCATGAGAGGAATTCAACCTACACATAACGGCATCAAAGGTGTGCTTACAAGTGTCTATAAGGAAGGGGGAGCTCGTGGACTTTATAGGGGTGCAGGACCAACCCTTGCTGGAATTCTTCCATATGCTGGTTTAAAGTTCTACATGTACGAGAAATTGAAGACTCACCTTCCAGAAGAACATCAAAAGTCCATTATGATGCGTCTTTCTTGTGGAGCTCTTGCTGGATTGTTTGGGCAGACTTTAACGTACCCTTTAGATGTTGTCAAGAGACAGATGCAGGTTGGCAGCCTACAAAGTGCTACTCATGAGAATGTCAGATATAAAAATACAATTGATGGACTTAGGACAATTGTTCGTAATCAAGGATGGAGGCAGCTATTTCATGGCGTGAGCATTAACTATATAAGGATTGTTCCTTCAGCTGCAATTAGTTTCACCACATACGACATGATGAAGTCTTGGCTTGGCGTACCACCTCAACAGTCAGTTTCGGCAGCATAA 1014 0.4359 MSMDSSQGSTIAGFVDNASIQRKQSSFDGVPVYVKELIAGGFAGALSKTTVAPLERVKILWQTRTPGFHSLGVYQSLNKLLKREGFQGLYKGNGAGVIRIVPYAALHFMTYERYKSWILNNYPVLGSGPFIDLLAGSAAGGTSVLCTYPLDLARTKLAYQVVDTRGGIKDGMRGIQPTHNGIKGVLTSVYKEGGARGLYRGAGPTLAGILPYAGLKFYMYEKLKTHLPEEHQKSIMMRLSCGALAGLFGQTLTYPLDVVKRQMQVGSLQSATHENVRYKNTIDGLRTIVRNQGWRQLFHGVSINYIRIVPSAAISFTTYDMMKSWLGVPPQQSVSAA* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02026 337 ProSiteProfiles Solute carrier (Solcar) repeat profile. 233 325 IPR018108 -
Lapu9g02026 337 SUPERFAMILY Mitochondrial carrier 34 321 IPR023395 -
Lapu9g02026 337 Pfam Mitochondrial carrier protein 233 326 IPR018108 -
Lapu9g02026 337 Pfam Mitochondrial carrier protein 33 121 IPR018108 -
Lapu9g02026 337 Pfam Mitochondrial carrier protein 129 229 IPR018108 -
Lapu9g02026 337 PRINTS Mitochondrial carrier protein signature 92 112 IPR002067 GO:0055085
Lapu9g02026 337 PRINTS Mitochondrial carrier protein signature 142 160 IPR002067 GO:0055085
Lapu9g02026 337 PRINTS Mitochondrial carrier protein signature 49 63 IPR002067 GO:0055085
Lapu9g02026 337 PRINTS Mitochondrial carrier protein signature 199 217 IPR002067 GO:0055085
Lapu9g02026 337 PRINTS Mitochondrial carrier protein signature 36 49 IPR002067 GO:0055085
Lapu9g02026 337 PRINTS Mitochondrial carrier protein signature 242 264 IPR002067 GO:0055085
Lapu9g02026 337 ProSiteProfiles Solute carrier (Solcar) repeat profile. 31 117 IPR018108 -
Lapu9g02026 337 ProSiteProfiles Solute carrier (Solcar) repeat profile. 127 226 IPR018108 -
Lapu9g02026 337 PANTHER SOLUTE CARRIER FAMILY 25 33 328 - -
Lapu9g02026 337 Gene3D Mitochondrial carrier domain 31 327 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02026 Lapu-Chr9 35053393 35058185 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02026 109 337 Organic Solute Cotransporters AT1G14560 69.099 1.24e-114 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02026 - - vum:124826084 646.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02026 9 35053393 35058185 Lapu9g02026 9 35053393 35058185 ECH