Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02004 ATGAAAGCATTTGCAATATCATCATCACTGCTTAACTTCAAATCTTTCTCTTTCCACCACTCTTCCTCTTCCAACCCCTTCTCCCCCCTCTCTTTCATTCTCCCCTCTCTCTCTCCCTCCCATCTCCGCCCAATCCACCGCCACTCTCCAATCATGGCCGCCGCTTCATTCAACTCCGAACGCGCCCGCGCTCCACCCGCCATTCCCATGCCCTCTCCCCCTCTCTCCAAGGCAAGTTCTCTCTCTCTCTCTCTCTCTATTCTCGCTCACTCTCACCTCACGCGCTTTGTTCTCTTTCAGTTCAAAATTGGCCTCTGTCAACTCTCCGTCACTCCCGACAAAGACAGGAACATCGCTCACGCGCGCACCGCCATTCAGGACGCTGCATCCAAGGGCGCTCAGCTTGTTCTTTTGCCTGAAATTTGGAACAGTCCTTATTCCAATGATAGTTTCCCTGTCTACGCTGAGGATATTGACGCTGGTGCCGATGCTTCTCCTTCCACCGCCATGCTCTCCGAACTCTCTCGTCTCTTGAAAATCACCATTGTCGGTGGTTCCATTCCAGAACGTTCTGGAGGTCGCTTGTACAACACTTGTTGCGTTTTCGGCACTGATGGAAAGCTGCTCGCCAAACACCGCAAGATACATCTTTTTGATATTGACATCCCTGGGAAGATTACCTTTATTGAGTCAAAAACTCTTACTGCTGGGGAGACTCCAACGATTGTTGACACAGAGGTTGGACGCATTGGTATAGGCATCTGTTATGACATTCGGTTTCCAGAACTAGCAATGATATATGCAGCTAGAGGTGCTCACTTACTCTGCTATCCTGGGGCATTTAACATGACAACTGGACCATTACACTGGGAGTTGTTGCAGAGGGCAAGGGCTACAGATAATCAGTTATATGTGGCTACTTGTTCGCCTGCCCGGGATACTGGATCTGGTTACGTGGCTTGGGGTCACTCCACTCTTGTTGGACCATTTGGAGAAGTTCTGGCAACTACAGAACACGAGGAGGCAATCATCGTTGCAGAAATTGATTATTCAATATTGGAGCAGAGAAGGACAAATCTCCCTGTAACTAAGCAAAGACGAGGTGATCTTTACCAGTTGGTGGATTTTCAGAGGCTGAATTCCTAG 1146 0.4913 MKAFAISSSLLNFKSFSFHHSSSSNPFSPLSFILPSLSPSHLRPIHRHSPIMAAASFNSERARAPPAIPMPSPPLSKASSLSLSLSILAHSHLTRFVLFQFKIGLCQLSVTPDKDRNIAHARTAIQDAASKGAQLVLLPEIWNSPYSNDSFPVYAEDIDAGADASPSTAMLSELSRLLKITIVGGSIPERSGGRLYNTCCVFGTDGKLLAKHRKIHLFDIDIPGKITFIESKTLTAGETPTIVDTEVGRIGIGICYDIRFPELAMIYAARGAHLLCYPGAFNMTTGPLHWELLQRARATDNQLYVATCSPARDTGSGYVAWGHSTLVGPFGEVLATTEHEEAIIVAEIDYSILEQRRTNLPVTKQRRGDLYQLVDFQRLNS* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02004 381 Gene3D - 99 376 IPR036526 -
Lapu9g02004 381 SUPERFAMILY Carbon-nitrogen hydrolase 101 374 IPR036526 -
Lapu9g02004 381 CDD nit 102 367 IPR045254 GO:0016811
Lapu9g02004 381 ProSitePatterns Uncharacterized protein family UPF0012 signature. 251 271 IPR001110 -
Lapu9g02004 381 Pfam Carbon-nitrogen hydrolase 103 353 IPR003010 GO:0006807
Lapu9g02004 381 ProSiteProfiles Carbon-nitrogen hydrolase domain profile. 101 350 IPR003010 GO:0006807
Lapu9g02004 381 PANTHER NITRILASE-RELATED 60 374 - -
Lapu9g02004 381 FunFam Omega-amidase chloroplastic 98 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02004 Lapu-Chr9 34885107 34890979 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02004 K13566 - gmx:100817195 564.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02004 9 34885107 34890979 Lapu9g02004 9 34885107 34890979 ECH