Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01976 ATGGCTGCGGAAGACAAGTGGTGCGTGGTGACCGGAGGCAGGGGTTTCGCCGCTCGGCATTTGGTGGAAATGCTAATTCGACAAAACGAATACTGTGTTCGCATCGCCGATTTGGGAGATAGCATTGATCTCGAGCCCGCCGAACAGCTGGGGCTTCTCGGCCAGGCCTTGCACTCTGGCCGGGCCCAATACGTCTCCCTCGATCTTCGCAACAAGGCCCAAGTCATGAAAGCATTGGAAGGAGTTGAGGTTGTGTTCCACATGGCTGCTCCAAACTCTTCCATTAACAACTACCAGCTTCATTATTCCGTAAATGTGCAAGGGACGAAGAATGTCATCGATGCTTGCGTGGAGCAGAAGGTGAAGCGACTCGTTTACACCAGCTCTCCCAGCGTGGTTTTTGATGGCGTTCATGGGATTCATAATGCTGATGAAACAATGCCTTATACACCTTCGCCTAATGATCATTACTCAGCAACGAAAGCCGAGGGTGAGACATTGATTATTAAAGCTAATGGGATTAATGGGCTCCTAACGTGCTGCATACGCCCTAGCAGCATATTTGGGCCAGGTGATAGACTGTTGGTGCCTACGCTAGTTGATACTGCCAGAAAAGGGAAATCCAAGTTCCTTATTGGCGATGGTAATAACGTTTATGATTTCACATATGTTGAAAATGTGGCTCATGCCCATATATGTGCTGATCGAGCTCTGGCTTCAGAAGGGCCAGTTTCAGAAAAAGCTGCTGGAGAGGCATATTTCATAACAAATATGGAGTCTATGAAATTTTGGGAGTTCGTGTCAGTGGTATTGGATGGTCTTGGATATGAAAGGCCAAGAATAAAGATCCCTGCTGTTGTTATCTTGCCCATTGCTCATTTGGTGGAGTGGATATATAGGCTGCTAGGCCCATATGGGATGAAGGTGCCCCAGTTAACCCCTTCAAGGATAAGACTGACGACCTGCAGCAGAACTTTTGATTGCTCAAAAGCAAAGGAACGCCTTGGCTATGCACCCATCGTAACACTACAGGAGGGCCTGCGGAGGACAATTGAATCATATGCACACTTGAAGGCAGAAAATCAACCTAAAACTAAAAGAAAAGGTCCCTCAAAAGCTTCCAAATATCTTGGAAGTGGAAGAGTTGCTGACACATTGCTTTGGAAGGATAAAAAGCAAACTCTCATCGCATTGTTAGTCTTGATTGCAATATACTTCAACTTCTTTGCATCTGAAAATACCATCATTAGTGCTCTGACAAAGCTTCTATTGTTCGCATCGATCTTTTTATTCATTCATGGCATTCTACCTGCAAAAATGTTGGGATATACTGTTGAGAAAATGCCCAAATCATGGTTTCACTTATCAGAAGATAGGTCACATAAATTTGCTCTCTCGGTGGCCTCTTCATGGAATATTGCTGTGAATGTTTTGAAGTCCCTCGCGGAAGGGAATGATTGGGTGCTGTTATCAAAGGTTGTTCTCTCTCTGTTCATTCTTAGCTTCCTTGGAGCCTTTTCACTTCAGAACTTGTATACCATAGGAGTTACATTTGCATTTATAGCTTTCTACGTATACGAACAGAAGGAGGAAGACATTGATGGCATATTTATAAAAACACATTCTTTTAGTTGCAAATTGAAATCTGATCTCACCAAAAAGCTTCTTTCTTCAAAGAAGATTGATTGA 1689 0.4393 MAAEDKWCVVTGGRGFAARHLVEMLIRQNEYCVRIADLGDSIDLEPAEQLGLLGQALHSGRAQYVSLDLRNKAQVMKALEGVEVVFHMAAPNSSINNYQLHYSVNVQGTKNVIDACVEQKVKRLVYTSSPSVVFDGVHGIHNADETMPYTPSPNDHYSATKAEGETLIIKANGINGLLTCCIRPSSIFGPGDRLLVPTLVDTARKGKSKFLIGDGNNVYDFTYVENVAHAHICADRALASEGPVSEKAAGEAYFITNMESMKFWEFVSVVLDGLGYERPRIKIPAVVILPIAHLVEWIYRLLGPYGMKVPQLTPSRIRLTTCSRTFDCSKAKERLGYAPIVTLQEGLRRTIESYAHLKAENQPKTKRKGPSKASKYLGSGRVADTLLWKDKKQTLIALLVLIAIYFNFFASENTIISALTKLLLFASIFLFIHGILPAKMLGYTVEKMPKSWFHLSEDRSHKFALSVASSWNIAVNVLKSLAEGNDWVLLSKVVLSLFILSFLGAFSLQNLYTIGVTFAFIAFYVYEQKEEDIDGIFIKTHSFSCKLKSDLTKKLLSSKKID* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01976 562 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 355 IPR036291 -
Lapu9g01976 562 FunFam Reticulon-like protein 1 359 - -
Lapu9g01976 562 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 8 355 - -
Lapu9g01976 562 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 9 283 IPR002225 GO:0003854|GO:0006694|GO:0016616
Lapu9g01976 562 ProSiteProfiles Reticulon domain profile. 382 562 IPR003388 -
Lapu9g01976 562 Pfam Reticulon 382 537 IPR003388 -
Lapu9g01976 562 Gene3D - 1 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01976 Lapu-Chr9 34612870 34620646 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01976 9 358 Lipid Metabolism Gene Families AT2G33630 32.249 1.41e-44 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01976 K23558 - gmx:100816854 992.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01976 9 34612870 34620646 Lapu9g01976 9 34612870 34620646 ECH