Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01975 ATGAATTGGGACGAGAACGATGATTTTGAGATCCCTCTTACTCAAAGGCCAACGACATATCACGCGCTCGCTTCCGTCGATAACAGTGAACGGCCATTGAAGAAATCTAAACGCAAAACGACGGCGCTTCGTGGCTGTGACAAGGAGAACGTCCGACCCAGCGAGGGTTTCGAAATTGAGAACTGCAGCTTGGATTTCATTCCTTCCTCCATAGATTGTGTTTCGGTTCGTAGCGTTCAACATTCGGAACAAGAGGACAGTGATTCTTCTTCCGCTTCTTTGTCGAAGCTGAAACAGAAGGGGGATTATCTTCGCAACTCGATAGAGTCGAAGCTGGTGGTTTCGAGAACCGCCGCGCATAACGCTGCAGATGCAAATTCTGATTCGGAGCTTGGTCTGTTGATGAATTTGTGCGACGAGTTGGAGGAAGTAGATAGTTCCGTTCGGTGTCCCCTGTGTGATGTTGATATTTCGAATTTGACCGAGGAACAGCGACATCTTCATACCAATAATTGTCTTGACGAACGAGATAACGTTACGGTTCCTGAAGACGATAAGGGTGCTCAACAGGTGCCAAAAGTCGCTTCTGTTGTTGATTGGCTTCACGGGCTCGGTTTGGGAAAGTATGAAGTTCTTTTCGTTAGGGAGGAAGTTGATTGGAACACCTTGCAATGGCTCACAGAAGAGGATCTTTTAAGCATGGGCATCACCGCGCTTGGGCCCAGAAAAAAGATTTTGCTTGCCTTGTGTGAACTAAGAAAAGGAGATGCCGCTACAAATGAAAAACAAGGGGGTGCTTTGACAGAGCCTAGAAGGATTAGAAACCAGAAAGTCAAAGTAAAACATGACAAATCTGAAAGAAAAGTTGATGGCACTATTAAACCCGCGGCAAACAAATTAATTACTGAATATTTTTTAGGGTTTGCTTCCAAAGAAAAGAAAGTTTCTGCCTCTCCTGGAGAACAAAAGGAAACGAAAAACAGTGACTGGGATTCTAGTCGTAAGCACAAATCAAAGAATGTGACAACAAATAGAAAGCTCCGTGATGTTCCTAAATGGTGTTCTGTACAAGGAACGCCTTTTCGAGTGGTCCGAGTGTTTGACAAATACATTATTTCATGCAGGATGCCTTCAAATATCTCAGAGGAGATTGTTCCCACTGGTTCCTCACACACTTCCACTTGGACCTGGAAGATCAAAGATGTTCATCATGAAAAACAATATTATCAAGGTCTTACCAAGTCATTCAATCATGGAAATATTTACTGCTCCTCCATTACAGCTAGACTAGTAAATACGAACATTGGAATTCCATATGATAAATTACATGTTTTGCCTCTGAACCAAAAGGTTGAAATAGCTGGTGTTGATGTGACTTGCTTTGATGCAAACCATTGTCCAGGTTCCATACTCATACTCTTTCAACCTCCGAATGGTAAGGCTGTACTTCACACGGGTGATTTCCGGTTTAGTGGCGAAATGACAATCAATCCTTTACTACATAAGTGTCCTATTAATACGCTCATTCTTGATACAACATACTGCAATCCACAGTATGACTTTCCAAAACAAGAGGCTGTAATTCAATTTGTTATTGATGCCATTCAAGCAGAAACTTTTAATCCCAAGACTCTTTTTCTGATTGGCAGCTATACAATTGGAAAAGAAAGGCTATTCTTGGAGGTTGCTCGTTCGCTTAGTAGAAAGGTTCACGTGACTGCGGCAAAGTTTCGTCTTTTAAAATGTTTGGAATTTAAGGATGAGGATATGCAGTGGTTCACTTCAGATGAAGATGAAAGCAACATTCATGTTGCCCCCATGTGGACGCTCGCAAGCTTCAAAAGATTGAAGCAAATATCAGGTCAATATAAGGGTCGGTACAATCTTATAGTTGCTTTCTCCCCTACTGGTTGGACGTTTGGCAAAGGTAAAAAGAAGTCTCCTGGAAGAAGATGGCAACAGGGTACTATTATAAGGTATGAAGTACCTTACAGTGAGCATAGCAGCTTCACAGAACTCAAAGAGTTTGTAAAACTTGTATCTCCTGATAACATTATACCAAGTGTGAATAACGATGGACCAGAATCTTCTGATGCAATGATTTCTCTATTATCTTGA 2118 0.4188 MNWDENDDFEIPLTQRPTTYHALASVDNSERPLKKSKRKTTALRGCDKENVRPSEGFEIENCSLDFIPSSIDCVSVRSVQHSEQEDSDSSSASLSKLKQKGDYLRNSIESKLVVSRTAAHNAADANSDSELGLLMNLCDELEEVDSSVRCPLCDVDISNLTEEQRHLHTNNCLDERDNVTVPEDDKGAQQVPKVASVVDWLHGLGLGKYEVLFVREEVDWNTLQWLTEEDLLSMGITALGPRKKILLALCELRKGDAATNEKQGGALTEPRRIRNQKVKVKHDKSERKVDGTIKPAANKLITEYFLGFASKEKKVSASPGEQKETKNSDWDSSRKHKSKNVTTNRKLRDVPKWCSVQGTPFRVVRVFDKYIISCRMPSNISEEIVPTGSSHTSTWTWKIKDVHHEKQYYQGLTKSFNHGNIYCSSITARLVNTNIGIPYDKLHVLPLNQKVEIAGVDVTCFDANHCPGSILILFQPPNGKAVLHTGDFRFSGEMTINPLLHKCPINTLILDTTYCNPQYDFPKQEAVIQFVIDAIQAETFNPKTLFLIGSYTIGKERLFLEVARSLSRKVHVTAAKFRLLKCLEFKDEDMQWFTSDEDESNIHVAPMWTLASFKRLKQISGQYKGRYNLIVAFSPTGWTFGKGKKKSPGRRWQQGTIIRYEVPYSEHSSFTELKEFVKLVSPDNIIPSVNNDGPESSDAMISLLS* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01975 705 CDD SAM_superfamily 196 249 - -
Lapu9g01975 705 Gene3D - 183 259 IPR013761 -
Lapu9g01975 705 MobiDBLite consensus disorder prediction 1 47 - -
Lapu9g01975 705 ProSiteProfiles SAM domain profile. 192 255 IPR001660 GO:0005515
Lapu9g01975 705 FunFam DNA cross-link repair 1A protein 520 667 - -
Lapu9g01975 705 SUPERFAMILY Metallo-hydrolase/oxidoreductase 412 688 IPR036866 -
Lapu9g01975 705 Gene3D - 520 667 - -
Lapu9g01975 705 Pfam DNA repair metallo-beta-lactamase 589 692 IPR011084 -
Lapu9g01975 705 SMART SAM_4 189 255 IPR001660 GO:0005515
Lapu9g01975 705 MobiDBLite consensus disorder prediction 316 344 - -
Lapu9g01975 705 SUPERFAMILY SAM/Pointed domain 193 254 IPR013761 -
Lapu9g01975 705 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 345 700 - -
Lapu9g01975 705 MobiDBLite consensus disorder prediction 28 47 - -
Lapu9g01975 705 CDD SNM1A-1C-like_MBL-fold 409 517 - -
Lapu9g01975 705 Pfam SAM domain (Sterile alpha motif) 193 250 IPR001660 GO:0005515
Lapu9g01975 705 Gene3D - 403 689 IPR036866 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01975 Lapu-Chr9 34606393 34612690 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01975 195 249 Glycosyltransferase AT3G07170 50.909 1.44e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01975 K15340 - gmx:100816321 1039.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01975 9 34606393 34612690 Lapu9g01975 9 34606393 34612690 ECH