Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01971 ATGGTTCAATTTGGAAATTTACATTCCCTTTTTTTGACGTCTGTGAATAATTGTTTGCCAATGGAATGTAATGATCAGTGTAGCGGAAGTGCTGTAAGCTTGAAGAGAAAGTCGACAGAAGATGGAGATCATGTACTCTTCAACACCTTTTCTCTGGATGACCTTAATGAAGATCTCTTTGAAAGGATACTTTCATGGCTTCCGACTTCCACATTCTTTCGCCTAAATTCTGTGTGCAAAAGATGGAAATCAGTTGCTGATTCTGCCAGTTTCAAGCTTGCCTGCTCTCACATTCCCTCAAGGGATCCGTGGTTTTTGATGGTTGCTCCCAACCTTAATCAATCTGTTATCTTTGATTCTGCTGAGAGCGCTTGGAAGAGACTAAACCACCCACCTCTTCTGCAAGAGGAATCTAACAAAAATTGCATGCCAGTTGCAGCCTCGGGTGGCTTGATTTGCCACCGAAAATTATCAGGAAACTTCATTGTGAGCAACCCCGTGACAGGATCTTGTACAGAACTCCCTCCACTTCATGCCCCACAGCACCAACCTCTCAATGCCATTGTGATGAGCACAGCTTGCAAAGACCAATTCTCCTTCAAAATTGTCTTAGTATTTGGTGAACTTCCAAATCTCTTGTTTAAAGTCTACAATTCAAGATCTGGCTGTTGGGATGATGAGACTGCTTTGAGGAGAAAGACAGAAGACAATTCAATGGAGCATGATTCCACTGATGACAATGTTGTGTACTACCTCAGCAAGGCTGGAATTGTTTTAGCTAGCAACATGCAGAGAAGCCCCTCTAAGCAATATTCATCAGTTATTACCAACAAAGACGGCCAAGAGATTGTGTATTTTCTTAGCTCATCAGGGAATGTAGTAGCTTGCAATTTGACAAGCAAGTGCTTCTTTGAGTACCCGAGGCTGTTGCCTGTTTTTAGTGAGTATTCCATTGATGTTGTGGAGTGCAAAGGGGAGATGCTAGTTGTTCTATTATCAGAATTCTTGGAAACTGCAATTCTTAGGGTATGGAAGTATGATGAGGCTAATAGAGGGTGGCATCAGATTGCAGCAATGCCTGCAGCACATTCTCATGAGTGGTATGGAAAGAAAGCAGATATTAACTGTGTTGGGGCTGGCAACCAAATATTGATATGCTTGAGTTCCCCTGATCTATGCACTTATGTTCTGTGTGATTTGGAAACCAACAAGTGGGTTGAATTGCCAAAATGTTGTATAAATGGAGAAGTCACTGACTTTATGTCTGCCTTTTCATTTGAGCCTCGGATAGAGGCTTCTGTGTGA 1305 0.4215 MVQFGNLHSLFLTSVNNCLPMECNDQCSGSAVSLKRKSTEDGDHVLFNTFSLDDLNEDLFERILSWLPTSTFFRLNSVCKRWKSVADSASFKLACSHIPSRDPWFLMVAPNLNQSVIFDSAESAWKRLNHPPLLQEESNKNCMPVAASGGLICHRKLSGNFIVSNPVTGSCTELPPLHAPQHQPLNAIVMSTACKDQFSFKIVLVFGELPNLLFKVYNSRSGCWDDETALRRKTEDNSMEHDSTDDNVVYYLSKAGIVLASNMQRSPSKQYSSVITNKDGQEIVYFLSSSGNVVACNLTSKCFFEYPRLLPVFSEYSIDVVECKGEMLVVLLSEFLETAILRVWKYDEANRGWHQIAAMPAAHSHEWYGKKADINCVGAGNQILICLSSPDLCTYVLCDLETNKWVELPKCCINGEVTDFMSAFSFEPRIEASV* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01971 434 CDD F-box_AtFBW1-like 53 91 - -
Lapu9g01971 434 SUPERFAMILY F-box domain 49 107 IPR036047 GO:0005515
Lapu9g01971 434 SMART fbox_2 55 95 IPR001810 GO:0005515
Lapu9g01971 434 Pfam F-box domain 52 91 IPR001810 GO:0005515
Lapu9g01971 434 SUPERFAMILY Galactose oxidase, central domain 115 412 IPR011043 -
Lapu9g01971 434 ProSiteProfiles F-box domain profile. 49 94 IPR001810 GO:0005515
Lapu9g01971 434 Gene3D - 48 101 - -
Lapu9g01971 434 PANTHER BNACNNG10540D PROTEIN 41 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01971 Lapu-Chr9 34547210 34549730 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01971 - - gmx:100786481 737.643