Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01960 ATGAAGATAGCGGTGGAAGGGTGCATGCATGGCGACCTGGACAGCGTGTACAGAACCCTTCAGCACTTGGAGAAATCGCAGAACACGAAAATCGACCTCCTCCTCTGCTGCGGCGATTTCCAAGCGGTGAGGAACCAGCATGACTTGCAGAGCTTGAACGTCCCACCCAAATATCGCTCAATGAATTCCTTCTGGAAGTACTATTCCGGCGCCGAGGTTGCCCCTTACCCCACCATCTTCATCGGCGGCAACCACGAAGCGTCCAATTATCTCTGGGAACTGTACTATGGAGGATGGGCTGCTCCTAATATCTACTTTCTGGGAGCTGCTGGGGTGGTGAGGTTTGGGAATGTCCGAATTGGTGGTCTCTCTGGGATTTATAATGGTCGAGACTATAAATTAGGACGCTTCGAGAGGCCTCCCTATGATCAGAGTACCATTAGGTCTGTGTATCATGTTCGTGAGTATGATGTTCGTAAACTAATGGAAGTTAAGGAGCCCATTGATGTTTTTCTTTCGCATGATTGGCCTGTGAGAATCACTGATTACGGGGATTGGAAGGAGCTTGTTCGGCGCAAGCACTATTTTAAGCAAGAGATAGAGGAAAAAAGATTAGGGAGTAAAGCTGCTGCTGAACTTCTAGGAAAACTGAAACCACATTATTGGTTTTCAGCTCACTTACACTGCAAGTTTGCTGCTCTTGTTCAACATGGAGAAGGAGGTCCACTGACAAAATTCCTTGCACTGGACAAATGCCTCCCAGGGCGTGATTTCTTACAGATTGTGGAAATTGAATCAGATGCAGGACCTTATGAGATTCAGTATGATGAAGAATGGTTAGCTGTAACTCGGAAATTCAACCCTATCTTCCCTTTGACCACCAAAGGTGCAGACTTCAGAGGTATAAATCTTGAGACGGAAGATTGTCTTGAATGGGTTAGAAGCAGGCTGCGTGAGAGGGGGTGCAAACCCTTTGAATTTGTTAGAACAGCTCCTTGCTATGACCCTTCACGATCCAATTTGGATGGTGCTTTGAATGTGAATCCTCGAAATCCCCAGACAGAATCTTTTTTGCAGCTTCTGGAACTTCCATATCTTCTTGATAGCAATCCTGACGCAAAGAACTTTTCATCTTATCCTTCTCATTCAGTTAAAAGAGGCAGTAGTGATGATAGTGAGGACATTCCCATTGATGATGTGGATGATGATGATGAAGAGCTCCCAAAAGTTGATAACGTTGAAAGTTGA 1248 0.4551 MKIAVEGCMHGDLDSVYRTLQHLEKSQNTKIDLLLCCGDFQAVRNQHDLQSLNVPPKYRSMNSFWKYYSGAEVAPYPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGAAGVVRFGNVRIGGLSGIYNGRDYKLGRFERPPYDQSTIRSVYHVREYDVRKLMEVKEPIDVFLSHDWPVRITDYGDWKELVRRKHYFKQEIEEKRLGSKAAAELLGKLKPHYWFSAHLHCKFAALVQHGEGGPLTKFLALDKCLPGRDFLQIVEIESDAGPYEIQYDEEWLAVTRKFNPIFPLTTKGADFRGINLETEDCLEWVRSRLRERGCKPFEFVRTAPCYDPSRSNLDGALNVNPRNPQTESFLQLLELPYLLDSNPDAKNFSSYPSHSVKRGSSDDSEDIPIDDVDDDDEELPKVDNVES* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01960 415 FunFam Lariat debranching enzyme 9 251 - -
Lapu9g01960 415 SUPERFAMILY Metallo-dependent phosphatases 1 253 IPR029052 -
Lapu9g01960 415 CDD MPP_Dbr1_N 3 259 IPR041816 -
Lapu9g01960 415 Gene3D - 8 244 IPR029052 -
Lapu9g01960 415 MobiDBLite consensus disorder prediction 374 415 - -
Lapu9g01960 415 Coils Coil 412 415 - -
Lapu9g01960 415 PANTHER RNA LARIAT DEBRANCHING ENZYME 1 405 - -
Lapu9g01960 415 MobiDBLite consensus disorder prediction 394 415 - -
Lapu9g01960 415 SMART DBR1_2 235 367 IPR007708 GO:0006397|GO:0016788
Lapu9g01960 415 Pfam Lariat debranching enzyme, C-terminal domain 244 364 IPR007708 GO:0006397|GO:0016788
Lapu9g01960 415 Pfam Calcineurin-like phosphoesterase 1 229 IPR004843 GO:0016787
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01960 K18328 - gmx:100812726 765.377