Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01949 ATGAGACACACTCCCAGGATTGGTGTCTACTGTGTCTTTGTGTGTTATAGTATATTGATTTTGTTGAACAGTGTTTGTGCATCAGCATCATCCTCTTCTCGCTGTAAAGCATGGTTAGTGCAATCCATTCCCACCAATATGCCCCACCTACACCATGTTCCTGGCACCCTCTCTACTGGGGATGTGCTTCGGTGGCTGGCTGCAAACTCCACCACGAGGCTTCACATAATTGCTCAATACTGGCAGCTTCTACCTTCCCCCGATGATCCTCGATCTGGGGACTATGGTTACACTCAACATCAGATGAACGAATTTGGTGCCGGTCAAGGTGTTTCTCTTTATCAAGAATTAGATGCTGCTGCTGATCGGAATGTTAGCATCAGGTTACTGTCCCACTCTGGAGTATATCCGACTTTTACCTTAGAACCATCCAAACTTGCTTACGGAAGGCCAAATGTTGAGAATGTGACATTGCTGCTAGAGGATTGGTGGGGCTCCGGCATTGTCCATGCCAAAGTTTGGATATCTGATAGTAGGGATGTGTATATTGGATCTGCAAACAATGACTGGAAATCTCTCACACAGGTCAAGGAACTCGGGATTTATTTTACTGATTGTCCTGAAATAGCTAAAAAGGTTGAGGTGTACTTTGACAATCTATGGACACTTGCATCTCTCAATTCTTCAGCTTACACGAAAACAGTGTTTGATCAAGAGTGGCAAATTGAGAGGAAGTTTCCTTGCTGGTCGCATTTCATTGATCATAAAGAGAGATGCAAGTCACCTCTTCCTCGATATCTGAAAACTCCTCATGCTGCAGCATATCCTACTCTCTCTGACCCTTATATGTTTGTGGTTTCATTTCAAACCCCTGGGAATAACTATTCAACAAAGCTGCCCCAAGTCAGCTATCTATCCTTTGCACCCCCAGAGCTATTATTTGGCAAATATCAAGCTGATGAGCAGGCATGGATTGATACAATCAAGTCTGTTGGAGATAAGCAGACAGTTAGAATCAGTACAATGGACTGGTTAGGTCAGTCAGAATTTATGGACCCAACAATTTACTGGTCATCCTTATCCTCTGCAATATCACAGGTAGTGTTTTCGAAGAATGCAACTGTACAGGTATTAGTGGCATATTGGGCACACTCCAACAGTAACACAGATGTGTACCTGAAGTCTCTCCTCTACACAAACAATCTCTGCTCTTCCTCAAAGTACAACAAATGCTCTGGGAAAGTTGAGATAAAATATTATGTGGTTCCAGGTTTCAACATGACAGGACCTGCTATTCACAGAGGAACTAGAACAGGAAACAAATACCCTGATTTTACGAGAGTCAATCATGGTAAATATGCAGTTAGTGATGTAAGGGCACACATTGGGACTAGCAATCTTGTATGGGACTACTTCTACACAACAGCAGGTGTCAGCTTTGGGACATACAACACTGCCATCGTCTCTCAACTTAGAGATATTTTTAACGCTGATTGGAACTCACCCTATGCTATTCCATTTGAACAGCTGGAGAAAGGTCACAAAAGTTCAATATAA 1557 0.4284 MRHTPRIGVYCVFVCYSILILLNSVCASASSSSRCKAWLVQSIPTNMPHLHHVPGTLSTGDVLRWLAANSTTRLHIIAQYWQLLPSPDDPRSGDYGYTQHQMNEFGAGQGVSLYQELDAAADRNVSIRLLSHSGVYPTFTLEPSKLAYGRPNVENVTLLLEDWWGSGIVHAKVWISDSRDVYIGSANNDWKSLTQVKELGIYFTDCPEIAKKVEVYFDNLWTLASLNSSAYTKTVFDQEWQIERKFPCWSHFIDHKERCKSPLPRYLKTPHAAAYPTLSDPYMFVVSFQTPGNNYSTKLPQVSYLSFAPPELLFGKYQADEQAWIDTIKSVGDKQTVRISTMDWLGQSEFMDPTIYWSSLSSAISQVVFSKNATVQVLVAYWAHSNSNTDVYLKSLLYTNNLCSSSKYNKCSGKVEIKYYVVPGFNMTGPAIHRGTRTGNKYPDFTRVNHGKYAVSDVRAHIGTSNLVWDYFYTTAGVSFGTYNTAIVSQLRDIFNADWNSPYAIPFEQLEKGHKSSI* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01949 518 Pfam PLD-like domain 112 221 IPR025202 -
Lapu9g01949 518 CDD PLDc_vPLD3_4_5_like_2 304 500 - -
Lapu9g01949 518 CDD PLDc_vPLD3_4_5_like_1 39 206 - -
Lapu9g01949 518 Gene3D Endonuclease Chain A 308 502 - -
Lapu9g01949 518 PANTHER PHOSPHOLIPASE D - RELATED 30 514 - -
Lapu9g01949 518 SUPERFAMILY Phospholipase D/nuclease 61 223 - -
Lapu9g01949 518 Gene3D Endonuclease Chain A 58 225 - -
Lapu9g01949 518 SUPERFAMILY Phospholipase D/nuclease 304 514 - -
Lapu9g01949 518 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 445 471 IPR001736 GO:0003824
Lapu9g01949 518 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 165 192 IPR001736 GO:0003824
Lapu9g01949 518 SMART pld_4 165 192 IPR001736 GO:0003824
Lapu9g01949 518 SMART pld_4 445 471 IPR001736 GO:0003824
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01949 K16860 - gmx:100778897 938.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01949 9 34374793 34378973 Lapu9g01949 9 34374793 34378973 ECH