Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01928 ATGCTACGTAAGCTTGTGTCGGGGCCACGCAAGAACAAGCCTGGCACCGTCCCCGTTCACCTCAACGTCTATGATCTCACCCCAATCAATGGCTATGCCTATTGGCTTGGCCTTGGTGTCTACCATTCTGGGGTTCAAGTTCATGGAGTTGAGTACGGTTTTGGTGCGCACGAGCATGACACAACGGGGATTTTTGAAGTGCAACCGAAACACTGTCCCGGGTTCACTTTCAGAAAGTCGATTTTCATCGGAACAACAGATCTGGGTCCGAAAGATGTTCGCACGTTCATGGAGAAACTGGCTCAGGAGTACTCTGGCAACACCTACCATCTCATCTCCAAAAATTGCAACCACTTCTGTAACGATGTTTGCCTCAAGTTAACGGGAAAGTCAATCCCTCGATGGGTTAACCGTCTTGCTCGACTTGGTCTTCTGTGCAACTGCGTTCTCCCACCTGGCCTAAATGACACAAAGGTTCCACTAGCTACATCAGACAGAGTTCAGGAGGGAGAAAAGAGGAAAATGAGAAGTCAATCCTGTAGGTACGAGGGTTCCTCCAATCCTTCATTTTCTCGACGTTCAGCAATTAAAAGTAGTAGCCAAAGACATTGTCTTCCTGGATCTTCATCGCTGCTTAGTGCTGCTTCAGCCTCAACGTTAACAGTGAAGTAG 672 0.4821 MLRKLVSGPRKNKPGTVPVHLNVYDLTPINGYAYWLGLGVYHSGVQVHGVEYGFGAHEHDTTGIFEVQPKHCPGFTFRKSIFIGTTDLGPKDVRTFMEKLAQEYSGNTYHLISKNCNHFCNDVCLKLTGKSIPRWVNRLARLGLLCNCVLPPGLNDTKVPLATSDRVQEGEKRKMRSQSCRYEGSSNPSFSRRSAIKSSSQRHCLPGSSSLLSAASASTLTVK* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01928 223 Gene3D PPPDE domains 12 168 IPR042266 -
Lapu9g01928 223 MobiDBLite consensus disorder prediction 166 208 - -
Lapu9g01928 223 Pfam PPPDE putative peptidase domain 18 150 IPR008580 GO:0008233
Lapu9g01928 223 MobiDBLite consensus disorder prediction 180 208 - -
Lapu9g01928 223 SMART DUF862_2a 17 155 IPR008580 GO:0008233
Lapu9g01928 223 PANTHER DESUMOYLATING ISOPEPTIDASE 16 198 IPR008580 GO:0008233
Lapu9g01928 223 ProSiteProfiles PPPDE domain profile. 17 154 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01928 Lapu-Chr9 34119217 34121449 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01928 K22763 - gmx:100306675 411.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g00653 8 24382928 24385946 Lapu9g01928 9 34119217 34121449 PCT