Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01905 ATGAAGCAAGCTTCGTCCGAGGCGGTTCCTTCGTTATCTTCCACGCCGTCCTTCACGGAGGCGGCGACATCGTCATCATCCTCCGCCGCCGCGGCTGAGGACCTGGCGGTGGGGTCGCGGGACGGTGGCGGCGGCGCTCAGGAGACGGTGGCCGTGGATCGGCGAGGCGAGTACTCTGCCGTGTGTCGATGGACGGTGCACAATTTTTCGAGAATAAAGGCTAGGGCACTGTGGAGCAAATACTTCGAGGTAGGCGGTTACGATTGTCGGTTGCTAATATACCCCAAGGGGGACTCACAGGCGCTTCCAGGGTACATCTCCATCTACCTCCAAATCATGGACCCTCGCGGCACCTCGTCTTCCAAATGGGACTGTTTCGCGAGTTATCGCTTGGCAATCGTGAACGTCGCCGACGATTCCAAAACCATTCATCGCGATTCTTGGCATCGATTCTCCAGTAAGAAGAAATCACACGGTTGGTGTGATTTCACGCCCTCTTCCACTGTTTTCGACCCCAAATTGGGATACCTCTTCAATACCGATTCCGTTTTGATCACTGCGGATATTCTCATTCTCAATGAGTCTGTTAATTTCACGCGGGACAACAATGAGTTGCAGTCTTCTTCTTCGTCCTCGTCCTCGACAAGCTCCTCCGTTGTTGCGGGTCCCGTGTCTGATGTGTTGAGTGGTAAGTTCACTTGGAAAGTGCATAATTTCAGTCTGTTTAAGGAGATGATCAAGACACAGAAGATAATGAGCCCGGTGTTTCCTGCGGGGGAGTGTAATTTGAGGATAAGTGTGTACCAGAGCTCTGTGAATGGGGTTGAGTATTTGTCTATGTGTTTGGAGAGCAAGGACACGGATAAGACTGTGGTGTTATCTGATAGGAGTTGTTGGTGTTTGTTTAGGATGTCTGTATTGAACCAGAAGCCTGGTTCCAATCACATGCATAGGGATTCTTATGGCCGGTTTGCGGCTGATAATAAGAGCGGTGACAATACCAGCTTGGGATGGAACGATTACATGAAGATGTCAGATTTTATCGGTGTGGATTCGGGGTTCTTGGTGGATGACACCGCGGTTTTTAGCACCTCATTCCATGTGATCAAGGAGTTTAGCAGCTTCTCCAAGAATGGTTCTGTGATTTCCGGGAGAAGTGGGAGTGGTGCTAGGAAGTCCGATGGGCATATTGGAAAGTTCACTTGGAGGATTGAAAATTTTACTAGGTTGAAGGATTTGCTTAAGAAGAGGAAAATCACGGGTCTGTGCATCAAGAGTCGGAGGTTTCAGATTGGTAATAGGGATTGTCGACTTATAGTTTACCCTCGAGGGCAGTCTCAGCCACCGTGCCACCTTTCAGTGTTTCTTGAAGTTACAGATTCAAGAAATACTTCCAGTGATTGGAGTTGTTTTGTTAGTCATCGTTTGTCTGTTGTGAACCAGAAGATGGAGGATAAATCTGTCACCAAGGAATCTCAGAACCGCTATTCGAAAGCTGCAAAGGATTGGGGTTGGCGTGAATTTGTGACACTCACCAGTCTCTTTGATCAAGATTCAGGTTTTCTTGTCCAGGACACTGTCATATTCTCTGCTGAAGTTCTTATATTGAAAGAGACATCAATAATGCAGGATTTTACTGAGCATGATTCTGAGTTAAGCAGCAGTGGCTCTCCTCAGGATAATTCTGGGAAAAGAAGTTCATTTACATGGAAAGTTGAGAATTTCCTGTCTTTCAAGGAAATAATGGAGACACGAAAAATCTTCAGTAAATTCTTTCAGGCTGGTGGATGTGAACTTCGAATTGGTGTATATGAGTCGTTTGACACCATATGTATTTATTTAGAGAGTGACCAGGCTGTTGGTAGTGATCCAGATAAAAATTTCTGGGTCAGATACAGGATGGCTGTTGTGAATCAAAAGAACCCAACCAAGACAGTGTGGAAAGAATCTTCTATCTGCACAAAGACATGGAATAATTCTGTTTTGCAATTCATGAAGGTGTCAGATATGTTAGAAGCAGATGCAGGATTTCTTGTACGTGACACTGTTGTTTTTGTATGTGAAATATTGGATTGCTGTCCTTGGTTTGAGTTTTCCGATTTAGAGGTTTTAGCATCAGAGGATGATCAGGATGCGTTGACAACTGACCCTGATGAGCTCATTGACTCTGAAGACAGTGAAGGGATAAGTGGAGATGAGGAAGATATTTTCAGAAATCTTCTTTCTAGAGCTGGATTCCATTTAACATATGGAGATAATCCATCTCAGCCACAGGTTACTTTAAGGGAGAAACTTCTAATGGATGCTGGTGCAATTGCAGGGTTTTTGACTGGTCTTCGAGTTTATCTTGATGATCCTGCAAAAGTTAAACGCCTGCTTCTACCTACCAAGCTCTCTGGTAGTTGTGATGGGAAGAAGGCTACCAAAGCTGATGAATCTTCCCCAAGTTTGATGAATTTGCTGATGGGAGTTAAAGTCTTGCAGCAAGCAATCATAGATTTACTATTAGATATAATGGTTGAGTGCTGCCAACCTTCTGAAGTAGGTCCTGTTGCTGATTCTGTTGATGCATGTTCCAAACCTTCTCCAGATGGAAGTGGAGCTGCTAGTCCTCTTGAGTGTGAAAGAGAAAGTGGAGCAATGGAGTCTGCACGTGTTCCTGTTAATGAGAGATTGGATTCTGTTGTTGAAGAAAGCAGTAATACATCTGCTGTGCAGAGCTCTGATTTAAAAGGGAATTGTATTCAGGAAAAAGCTGTTCCTGGACATCCCATTTGTCCACCAGAGACATCTGCCTCTGCTTCAGAAAACGCATCCTTTCGGTCAAAGACCAAGTGGCCAGAACAGTCTGAGGAGCTTTTAGGTTTGATTGTAAACTCACTAAGAGCTTTGGATGGGGCTGTTCCTCAAGGCTGTCCAGAACCAAGACGCCGGCCTCAGTCTGCACAAAAGATTAGTCTTGTATTGGACAAGGCACCTAAGCATTTACAAGCTGACCTAGTTGCTCTGGTACCTAAATTGGTTGAGCAGTCAGAACACCCACTTGCTGCCTATGCACTTCTTGAACGACTTCAAAAGACAGATGCAGAACCTGCTTTACGAATACCTGTTTTTGGGGCACTTTGTCAATTGGAGTGTGGTAGTGAAGTGTGGGAACGCATTCTGTTTCAGTCATTTGAGCTTTTGACAGATTCAAATGATGAACCCCTTGCTACAACAATAGATTTTATATTCAAAGCGGCATCTCAATGTCAACACCTCCCTGAAGCAGTTAGGTCTGTTCGTGTCAGGCTGAAAAATCTAGGTCTTGAGGTGTCACCTTGCGTGCTTGATTTTTTGAGTAAGACTATAAATAGTTGGGGGGATGTTGCTGAAACCATACTTAGGGACATTGATTGTGACGATGACTATGGTGACAATTGCTCTGCTCTGCCATGTGGGATTTTCCTATTCGGTGAACATGGAGCTTCTCCTAGTGGCCTGCATGTGATTGATGAGCAGGCTTATCATGCTAGTCGTCATTTTTCTGATATTTACATACTGTTTGAGATGTTATCTATTCCTTGCCTTGTTGCCGAAGCTTCTCAAACATTTGAGAGAGCTGTAGCTCGAGGTGCAATAAGTGCTCAGTCTGTAGCCCTGGTATTGCAAAGCCGTCTTTCCCAAAGATTGAACAATAATGGAAGATATGTTTCTGAAAATTTCCAACATTCAGATGGTGCTGCAGAGGGAGATGCTTGTGAGCAATTGGGAGTTCAGAGGGATGATTATACTTCTGTTCTTGGCCTTGCTGAAAATTTGGCCCTCTCTAGAGATCCATGCGTGAAAGAATTTGTTAAACTGCTCTACATGATAATGTTTAGATGGTTTGCCAATGAATCTTATAGGGGGAGGATGTTGAAGAGGCTAGTTGACCGTGCCACTAGCAATACTGACAATGGTCGTGAAGTAGATTTTGATTTGGATATCTTGGTTACTTTGGTCTGTGAGGAGCAGGAGTTTATTAGGCCTGTTTTGAGTATGATGCGTGAAGTTGCTGAACTTGCAAATGTTGATAGGGCTGCACTATGGCACCAGTTGTGCGCTAGTGAGGATGAAATTATTCGTGTCCGTGAAGAAAGCAAAACTGAGATTTCTAATATGGCTAAAGAAAAAGCTATTATATCACAAAAGCTGAGTGAATCTGAAGTGACAAACAGTCGTTTGAAGTCTGAAATGAGGGCTGAGATGGATCGATTTTCTCGGGAAAAGAAGGAACTAGCTGAACAAGCTCAAGAAGTTGAGAGTCAGCTTGAATGGCTCCGCTCAGAACGGGATGATGAAATTGCAAAGCTCTCTGCAGAGAAGAAAGCTCTTCATGACCGTTTACATGATGCTGAGACACAACTTTCTCAACTGAAGTCTCGGAAACGTGATGAATTAAAGAAAGTAGTCAAGGAGAAAAATGCTCTTGCTGAAAGATTGAAGAATGCTGAGGCTGCACGCAAGAGGTTTGATGAAGAACTGAAAAGATTTGCGACAGAGAATGTGACTCGGGAGGAAATTCGGCAATCACTTGAAGATGAAGTCCGTAGACTGACTCAAACAGTTGGGCAAACTGAAGGGGAAAAACGTGAGAAGGAAGAGCAGGTTGCCAGGTGTGAAGCATATATTGATGGCATGGAATCAAAGTTACAAGCTTGCCAGCAATATATTCACACACTTGAGGCGTCGCTCCAGGAGGAAATGTCAAGACATGCCCCTCTATATGGTGCTGGTCTGGAGGCTTTGTCATTGAAAGAGTTGGAAACACTATCACGTATTCATGAAGATGGGCTCAGGCAGATCCATGCCATTCAACAGCGTAAAGGGAGTCCTGCTGGGAGCCCTCTTGTGAGCCCCCATGCGCTCCCTCACACCCATGGATTGTATCCAGCTGCCTCGCCCCCTATGGCTGTGGGACTGCCTCCCTCAATCATCCCAAATGGTGTAGGGATCCACAGCAACGGCCATGTGAATGGTGCAGTTGGACCTTGGTTTAACCACTCTTGA 5031 0.449 MKQASSEAVPSLSSTPSFTEAATSSSSSAAAAEDLAVGSRDGGGGAQETVAVDRRGEYSAVCRWTVHNFSRIKARALWSKYFEVGGYDCRLLIYPKGDSQALPGYISIYLQIMDPRGTSSSKWDCFASYRLAIVNVADDSKTIHRDSWHRFSSKKKSHGWCDFTPSSTVFDPKLGYLFNTDSVLITADILILNESVNFTRDNNELQSSSSSSSSTSSSVVAGPVSDVLSGKFTWKVHNFSLFKEMIKTQKIMSPVFPAGECNLRISVYQSSVNGVEYLSMCLESKDTDKTVVLSDRSCWCLFRMSVLNQKPGSNHMHRDSYGRFAADNKSGDNTSLGWNDYMKMSDFIGVDSGFLVDDTAVFSTSFHVIKEFSSFSKNGSVISGRSGSGARKSDGHIGKFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQPPCHLSVFLEVTDSRNTSSDWSCFVSHRLSVVNQKMEDKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVIFSAEVLILKETSIMQDFTEHDSELSSSGSPQDNSGKRSSFTWKVENFLSFKEIMETRKIFSKFFQAGGCELRIGVYESFDTICIYLESDQAVGSDPDKNFWVRYRMAVVNQKNPTKTVWKESSICTKTWNNSVLQFMKVSDMLEADAGFLVRDTVVFVCEILDCCPWFEFSDLEVLASEDDQDALTTDPDELIDSEDSEGISGDEEDIFRNLLSRAGFHLTYGDNPSQPQVTLREKLLMDAGAIAGFLTGLRVYLDDPAKVKRLLLPTKLSGSCDGKKATKADESSPSLMNLLMGVKVLQQAIIDLLLDIMVECCQPSEVGPVADSVDACSKPSPDGSGAASPLECERESGAMESARVPVNERLDSVVEESSNTSAVQSSDLKGNCIQEKAVPGHPICPPETSASASENASFRSKTKWPEQSEELLGLIVNSLRALDGAVPQGCPEPRRRPQSAQKISLVLDKAPKHLQADLVALVPKLVEQSEHPLAAYALLERLQKTDAEPALRIPVFGALCQLECGSEVWERILFQSFELLTDSNDEPLATTIDFIFKAASQCQHLPEAVRSVRVRLKNLGLEVSPCVLDFLSKTINSWGDVAETILRDIDCDDDYGDNCSALPCGIFLFGEHGASPSGLHVIDEQAYHASRHFSDIYILFEMLSIPCLVAEASQTFERAVARGAISAQSVALVLQSRLSQRLNNNGRYVSENFQHSDGAAEGDACEQLGVQRDDYTSVLGLAENLALSRDPCVKEFVKLLYMIMFRWFANESYRGRMLKRLVDRATSNTDNGREVDFDLDILVTLVCEEQEFIRPVLSMMREVAELANVDRAALWHQLCASEDEIIRVREESKTEISNMAKEKAIISQKLSESEVTNSRLKSEMRAEMDRFSREKKELAEQAQEVESQLEWLRSERDDEIAKLSAEKKALHDRLHDAETQLSQLKSRKRDELKKVVKEKNALAERLKNAEAARKRFDEELKRFATENVTREEIRQSLEDEVRRLTQTVGQTEGEKREKEEQVARCEAYIDGMESKLQACQQYIHTLEASLQEEMSRHAPLYGAGLEALSLKELETLSRIHEDGLRQIHAIQQRKGSPAGSPLVSPHALPHTHGLYPAASPPMAVGLPPSIIPNGVGIHSNGHVNGAVGPWFNHS* 1677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01905 1676 CDD MATH 398 533 IPR002083 GO:0005515
Lapu9g01905 1676 ProSiteProfiles MATH/TRAF domain profile. 59 189 IPR002083 GO:0005515
Lapu9g01905 1676 Coils Coil 1516 1543 - -
Lapu9g01905 1676 PANTHER TRAF-LIKE FAMILY PROTEIN 25 1676 - -
Lapu9g01905 1676 ProSiteProfiles MATH/TRAF domain profile. 229 366 IPR002083 GO:0005515
Lapu9g01905 1676 MobiDBLite consensus disorder prediction 1 29 - -
Lapu9g01905 1676 Gene3D - 1434 1626 - -
Lapu9g01905 1676 MobiDBLite consensus disorder prediction 547 566 - -
Lapu9g01905 1676 SUPERFAMILY TRAF domain-like 566 690 - -
Lapu9g01905 1676 Coils Coil 1403 1508 - -
Lapu9g01905 1676 ProSiteProfiles MATH/TRAF domain profile. 565 689 IPR002083 GO:0005515
Lapu9g01905 1676 SMART math_3 570 670 IPR002083 GO:0005515
Lapu9g01905 1676 SMART math_3 402 514 IPR002083 GO:0005515
Lapu9g01905 1676 SMART math_3 61 169 IPR002083 GO:0005515
Lapu9g01905 1676 SMART math_3 234 347 IPR002083 GO:0005515
Lapu9g01905 1676 ProSiteProfiles MATH/TRAF domain profile. 397 533 IPR002083 GO:0005515
Lapu9g01905 1676 CDD MATH 230 362 IPR002083 GO:0005515
Lapu9g01905 1676 CDD MATH 63 189 IPR002083 GO:0005515
Lapu9g01905 1676 SUPERFAMILY TRAF domain-like 398 539 - -
Lapu9g01905 1676 Pfam MATH domain 429 535 IPR002083 GO:0005515
Lapu9g01905 1676 Pfam MATH domain 66 191 IPR002083 GO:0005515
Lapu9g01905 1676 Pfam MATH domain 578 685 IPR002083 GO:0005515
Lapu9g01905 1676 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 45 196 IPR008974 GO:0005515
Lapu9g01905 1676 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 225 372 IPR008974 GO:0005515
Lapu9g01905 1676 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 552 691 IPR008974 GO:0005515
Lapu9g01905 1676 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 389 542 IPR008974 GO:0005515
Lapu9g01905 1676 SUPERFAMILY TRAF domain-like 58 197 - -
Lapu9g01905 1676 SUPERFAMILY TRAF domain-like 227 372 - -
Lapu9g01905 1676 CDD MATH 567 689 IPR002083 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01905 Lapu-Chr9 33850534 33859946 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01905 - - ccaj:109798115 3137.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01905 9 33850534 33859946 Lapu9g01905 9 33850534 33859946 ECH