Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01896 ATGGCTCCCACGACGATCCGGAAGGCGATTGGGGTGGTCAAGGACCAGACCAGCATAGGGATTGCCAAGGTCGCCAGCAACATGGCGCCGGAGATGGAGGTTGCGATTGTCAAGGCCACCAGCCACGACGACGACCCCGCCAGCGAGAAGTACGTCAGGGAGATCTTGAATCTCATGTCGCACTCCCGCGGCTACGTCCACGCCTGCGTCTCCGCGGTGTCCAAGCGTTTGGGGAAGACGCGCGACTGGATAGTGGCGCTCAAGGCGCTCATGCTCGTACACCGCCTCATGAACGAGGGTCCCCCTCTGTTTCAGGAGGAGATCCTGTACGCCACTCGCAGAGGAACACGGCTCCTCAATATGTCTGACTTCAGAGACGAGGCTCACTCCAGCTCCTGGGATCACTCCGCTTTCGTGAGGACCTATGCTATGTATCTCGACCAGAGGCTTGAGTTGATGCTATTTGATAGAAAAAGCACCGCCGGCGGTGCCGGCGGTGGTAGTGTTGGTGGCGGCATTGCTGATGATAAGTTTGGCGGAAGGGACAATTTCCGGTCGCCGCCGTATGAGTACGGTGGTGGGGAATTTAGAGGGGAAGGTAGTTATGGGTATGAGAATGGGATGAGGAGGACGAGGTCTTTTGGGGACATGAGTGAATCGGTGGGCAGGGGGGATGCGAAGAGTCTTGTGAGTGTGACTCCTTTGAGGGATATGACTCCGGAGAGGGTTTTCGGTAAGATGGGTCATTTGCAGAGGTTGCTGGATCGGTTTTTGGCTTGTAGGCCTACTGGGTTGGCGAAGAATAGTAGGATGGTCTTGATTGCTTTGTACCCGGTGGTTAAGGAGAGTTTTCAGTTGTATGCTGATATATGTGAGGTTTTGGCTGTGTTGCTTGACAAGTTCTTTGATATGGAGTATGCTGATTGCGTGAAGGCTTTTGATGCTTATGCCAGTGCGGCTAAGCAGATTGATGAGCTTGTTGCTTTTTACAGTTGGTGTAAGAATACTGGTGTGGCCAGGTCCTCGGAGTACCCTGAGGTTCAGAGGATTACCAGCAAGTTGCTTGAGACGTTGGAGGAGTTTGTGAGGGATAGGGCCAAGAGGCCGAAGAGTCCCGAGAGAAAAGAGGAGGCTCCACCTGTAGAGAAGGTAGAGGAGGAGCCGGCACCAGATATGAATGAAATCAAGGCATTGCCTCCACCAGAGAATTATACCCCTCCTCCTCCACCTGAGCCAGAGCCTAAGCCCCAGCCGCAGGTTACGGAGGATTTAGTGAATCTGAGAGATGATGCAGTCACTGCAGATGACCAGGGGAATAGGTTTGCTTTGGCACTGTTTGCTGGTGCGCCTGCTAATAATGCAAATGGATCATGGGAAGCATTCCCTTCAAATGGACAACCAGAAGTGACTTCAGCCTGGCAAACCCCGGCAGCAGAGCCTGGGAAAGCTGATTGGGAATTAGCATTAGTGGAGACTGCTAGCAATTTGTCGAAGCAGAAAGCAGCTTTAGGTGGTGGGTTGGATCCTCTATTGTTGACTGGCATGTATGATCAAGGAATGGTTAGGCAGCATGTCAGCACTACCCAATTGAGTGGAGGGAGTGCAAGCAGTGTGGCATTGCCGGGACCAGGGAAGACTACAACTCCTGTTTTGGCTCTCCCGGCCCCAGATGGATCTGTGCAGCCAGTTAATCAGGATCCATTTGCTGCATCATTGAGCATTCCACCCCCGTCCTATGTGCAAATGGCTGATATGGAGAAGAAGCAGCATTTGCTTGTGCAGGAGCAGCAGGTGTGGCATCAGTATGCAAGGGATGGGATGCAAGGCCAATCTAGTTTGGCCAAACTGAGTGGCACTGGATACCATGTCGGAGGTCCTATGCCCATGATGCCTTATGGAATGCCCCCAGTCAATGGAATGGGACCTCCAACCGGGTATTATCACACTCCTTACTGA 1956 0.5291 MAPTTIRKAIGVVKDQTSIGIAKVASNMAPEMEVAIVKATSHDDDPASEKYVREILNLMSHSRGYVHACVSAVSKRLGKTRDWIVALKALMLVHRLMNEGPPLFQEEILYATRRGTRLLNMSDFRDEAHSSSWDHSAFVRTYAMYLDQRLELMLFDRKSTAGGAGGGSVGGGIADDKFGGRDNFRSPPYEYGGGEFRGEGSYGYENGMRRTRSFGDMSESVGRGDAKSLVSVTPLRDMTPERVFGKMGHLQRLLDRFLACRPTGLAKNSRMVLIALYPVVKESFQLYADICEVLAVLLDKFFDMEYADCVKAFDAYASAAKQIDELVAFYSWCKNTGVARSSEYPEVQRITSKLLETLEEFVRDRAKRPKSPERKEEAPPVEKVEEEPAPDMNEIKALPPPENYTPPPPPEPEPKPQPQVTEDLVNLRDDAVTADDQGNRFALALFAGAPANNANGSWEAFPSNGQPEVTSAWQTPAAEPGKADWELALVETASNLSKQKAALGGGLDPLLLTGMYDQGMVRQHVSTTQLSGGSASSVALPGPGKTTTPVLALPAPDGSVQPVNQDPFAASLSIPPPSYVQMADMEKKQHLLVQEQQVWHQYARDGMQGQSSLAKLSGTGYHVGGPMPMMPYGMPPVNGMGPPTGYYHTPY* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01896 651 Pfam ANTH domain 32 364 IPR011417 GO:0005543
Lapu9g01896 651 CDD ANTH_N_AP180_plant 33 152 - -
Lapu9g01896 651 MobiDBLite consensus disorder prediction 400 417 - -
Lapu9g01896 651 Gene3D - 2 156 IPR008942 -
Lapu9g01896 651 SUPERFAMILY GAT-like domain 234 364 - -
Lapu9g01896 651 SUPERFAMILY ENTH/VHS domain 30 151 IPR008942 -
Lapu9g01896 651 ProSiteProfiles ENTH domain profile. 24 160 IPR013809 -
Lapu9g01896 651 MobiDBLite consensus disorder prediction 363 420 - -
Lapu9g01896 651 PANTHER CLATHRIN ASSEMBLY PROTEIN 7 594 IPR045192 GO:0048268|GO:0072583
Lapu9g01896 651 SMART enth_2 30 160 IPR013809 -
Lapu9g01896 651 FunFam putative clathrin assembly protein At2g25430 230 374 - -
Lapu9g01896 651 MobiDBLite consensus disorder prediction 363 392 - -
Lapu9g01896 651 FunFam Clathrin coat assembly protein 3 156 - -
Lapu9g01896 651 Gene3D ANTH domain 230 375 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01896 Lapu-Chr9 33756738 33759767 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01896 - - gmx:100803282 1135.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01896 9 33756738 33759767 Lapu9g01896 9 33756738 33759767 ECH