Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01885 ATGGACTTAGAAGGAAGTGAAAAGGATTCAGTGGTGACTCAGATCAGCATTGGTGGATTTGACAGTGAGGTCAAAGCCAGTGATCTGGTACATTATTTGGAGGATAAAATTGGACTTGTCTACAGGTGTAGGTTGAAGACTTCTTGGACCCCTCCAGAGTCATATCCAGAATTTAATATCACCGATACTGCAAAGATTAGGAGGACGGATGACTATAAGAAAGTCGAGCCTCATGCCTTTGTGCATTTTGCATCTCCAGAATCTGTGACTGCTGCCCTGAATGCTTCAGGTTGTTGTGATATGTTTTTAAAGAATCAACCCTTAAAGGTCAGCTGTGGACCTGAAAATCCCTACTTCCTGAACCAAAGGAGGAGAACTACAATTCCTTTTAAGATGTCTGATGTAATTGTTGAAATTGGGACATTGGTTAGGCCAGGAGAGTTTTTTGTTGCTTGGAAAGGACCTGATAAAGGAGTAAAATTTCTAGTGGATCCTTTTGATGGCATGTGCAGGTTTTGTTTCACTAGAGATACTGCATTCTCATTCAAAGGTGTAGAAAAAAAAGCAGTTATAAAGTGTGATTTTCAGGTGGGATTCCTTGTTAGAGACATTAATGAGGTAAGGAGATATAATGATACGTCGTATCTCGTTGTTTTATTACACCTAGCTTCTTCACCTTGGGTTTCGTACAGAACTGCCGAGGATGATATTGAAGATTCAGTACCATTTGATTTGCTGGATGATGATGACCCTTGGATTAGAACCACTGATTTTACTCCTAGTGGGGCAATTGGTCGGTGCAATTTTTATAAAATTTCTATTCCTCCTCGGCATGGTGCAAAATTGACGAAGGCCATGCTTTATCTGAAAGGTCAAAGAGTGCAAATGCAAGAGCTTCCACTTAAGCAGACTCTTATGGCACTGAATGAACCTGATTTTGGCACACCCATGTCAGATGCTTTCTTCTACATAAATGATCAGAAGGGCATTCCTTTTGACATAATGTTTTTGGTCAATGCTATTGTACATAAAGGCATATTCAACCAGCACAAGTTGTCAGACAGGTTTTTTGAATTGCTCAGAAATCAATCTAAGGAGCTCAACCTGGCTGCCCTGAAGCATTTATGTTCTTACAAGCGCCCGGTATTTGATGCAACTAAGAGGCTAAAAGTAGTTCAAGAATGGTTGCTCAGAAATCCCAAACTTTATCAGATCTCTAAACAGTTGGATGATATTGTGGAGGTTAGAAGATTGGTTATTACTCCATCAAAAGCATATTGTATACCACCTGAAGTTGAACTGTCCAACAGGGTTCTCAGAAAATTCAGAGAAGTTTCAGATTGTTTCTTGAGAGTCACCTTTATGGATGAAGGCATGCAGACAATTAATGTGAATGCCCTTAACTATTATGTTGCTCCTATTGTGAAGGAAATCACATCGAACTCTTTCCCTCAAAAGACAAAAATATATAAAAGGGTGAAGACAATCTTGGAAAAGGGATTTTACTTTTGTGGCCGAAAATATTCATTTTTAGCTTTTTCATCCAACCAACTTAGAGATCGTTCTGCTTGGTTTTTTGCTGAAGACAAAATAAGATGTGATGAAATACGGAATTGGATGGGCAAGTTTAATCAGAGGAATGTTGCAAAATGTGCTGCTAGGATGGGACAGTGCTTCTCATCTACCTATGCAACAGTTGAAGTTGTTGCAAATAAAGTTAACTCCATGCTACCTGATGTTGAGCGGAATAATTACGTTTTCTCTGATGGTATTGGTATTATCACTCCTGATCTTGCAAGGGAAGTTGCAGAAAAATTGAAATTGGACAATATACCCTCTGCTTACCAGATCAGATACGCTGGTTTTAAAGGGGTGGTAGCCTCTTGGCCTGCTAAAGGGGATGGGATCAGACTTTCTTTGAGGCCTAGTATGAACAAGTTTCAATCTACTCATACTATCTTGGAGATCTGTTCATGGACTAGGTTTCAGCCTGGTTTTCTTAACAGGCAGATTATAACATTGCTTTCAGCGCTGGGTGTGCCTGATGAAATATTTTGGCAAATGCAGGAGGCAATGCTTTGGAAGTTAAATAAAATGCTTGTGGATGCAGATATCGCTTTTGACGTTCTTACCAAATCATGTGCTGAGCATGGGAATGCTGCAGCAATAATGTTAAGTTGCGGCTTCAGTCCCCTAACAGAGCCTCATCTTAGAGGTATGATAACTTCTACACGTGCTGCACAGCTTTGGGGACTTCGAGAAAAGTCCAGGATTTTTGTATCATCTGGGCGATGGTTGATGGGTGTCTTAGATGAGTCGGGTGTGCTTGAACATGGGCAGTGCTTTGTTCAAGTGTCTACTCCCTCTCTTGAAAATTGTTTCTCAAAGCATGGGTCAAGATTTTCAGAGACAAAGAACCTGCAAGTAGTTAAAGGTTTTGTGGTTATAGCCAAAAATCCTTGTCTTCATCCGGGAGATGTACGAGTCTTGGAGGCAGTTGATGCCCCCGATTTACATCATTTATATGATTGTCTTGTTTTCCCTCAAAAAGGTGACAGACCCCATACAAATGAAGCTTCTGGAAGTGACCTTGACGGGGATCTATATTTTGTCACATGGGATGAAAATCTCATTCCACCAAGTAAGAGGAGCTGGATACCTATGGAGTATGCCGCTCAAGAAAGCAAACTTCTGACACGTCAAGTCATGACTCGAGACATCATTGAATTTTTTGTCAGAAACATGGTAAATGAACATTTGGGTGCTATCTGCAACGCACATGTGGTACATGCTGATTCCAGTGACTATGGTGCCTTGGATGAGAAATGCGTCCACTTGGCGGAGCTAGCAGCTACTGCTGTTGATTTTCCAAAGACGGGGAAGCTTGTTACTATGCCTTCTCATCTGAAACCAAAACTGTACCCTGATTTCATGGGGAAAGAGAAGCACCAGTCATACAGGTCGAAGAAAATTCTGGGTAGACTTTACCGGCGTATCAAAGATGCTTATGATGAAGATATTGATGCACCCTATTTGAACTTTGTGTCTGGTGACATACCATATGATAAAGATCTTGAGGTTCCAGGATCTGCTGATTTTATTGCTGATTCCTGGGAGCAAAAATGTGCATATGACGGCCAGTTGAGTGGGCTACTTGGTCAATACAAAGTGAAAAGAGAAGAGGAAGTTGTTACTGGACAGATCTGGTCCATGCCAAAATACAACAGTAGGAAGCAAGGGGAGCTTAAGGAGAGGCTGAAGCACTCATACAGTGCCCTGAAAAAGGAATTTAGGCACACTTTTGAAAAATTGAGTTCAGATGTTGGAGATTTAAGTGAGGAAGAAAAAAATTTGTTGTATGAGCAGAAAGCTTCGGCCTGGTATCAGGTGACATATCATCCTCATTGGGTCAAAAAGTCTCTTGATCTGCAAGATAAATCCCCAGAGAACCTAGAGGCTGATAGTTTGGGAAGCACGGTCATGTTGAGTTTTCCTTGGATTGCAGTTGATTACCTAGCTCGCACAAAAATAAGGGAGCGCCAACGGAAATCTGGAAATTTTGATTCAACTAAGCCAGTTGATTCTCTGGCAAAGTTTCTGTCTGAAAGGTTATAG 3615 0.41 MDLEGSEKDSVVTQISIGGFDSEVKASDLVHYLEDKIGLVYRCRLKTSWTPPESYPEFNITDTAKIRRTDDYKKVEPHAFVHFASPESVTAALNASGCCDMFLKNQPLKVSCGPENPYFLNQRRRTTIPFKMSDVIVEIGTLVRPGEFFVAWKGPDKGVKFLVDPFDGMCRFCFTRDTAFSFKGVEKKAVIKCDFQVGFLVRDINEVRRYNDTSYLVVLLHLASSPWVSYRTAEDDIEDSVPFDLLDDDDPWIRTTDFTPSGAIGRCNFYKISIPPRHGAKLTKAMLYLKGQRVQMQELPLKQTLMALNEPDFGTPMSDAFFYINDQKGIPFDIMFLVNAIVHKGIFNQHKLSDRFFELLRNQSKELNLAALKHLCSYKRPVFDATKRLKVVQEWLLRNPKLYQISKQLDDIVEVRRLVITPSKAYCIPPEVELSNRVLRKFREVSDCFLRVTFMDEGMQTINVNALNYYVAPIVKEITSNSFPQKTKIYKRVKTILEKGFYFCGRKYSFLAFSSNQLRDRSAWFFAEDKIRCDEIRNWMGKFNQRNVAKCAARMGQCFSSTYATVEVVANKVNSMLPDVERNNYVFSDGIGIITPDLAREVAEKLKLDNIPSAYQIRYAGFKGVVASWPAKGDGIRLSLRPSMNKFQSTHTILEICSWTRFQPGFLNRQIITLLSALGVPDEIFWQMQEAMLWKLNKMLVDADIAFDVLTKSCAEHGNAAAIMLSCGFSPLTEPHLRGMITSTRAAQLWGLREKSRIFVSSGRWLMGVLDESGVLEHGQCFVQVSTPSLENCFSKHGSRFSETKNLQVVKGFVVIAKNPCLHPGDVRVLEAVDAPDLHHLYDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWIPMEYAAQESKLLTRQVMTRDIIEFFVRNMVNEHLGAICNAHVVHADSSDYGALDEKCVHLAELAATAVDFPKTGKLVTMPSHLKPKLYPDFMGKEKHQSYRSKKILGRLYRRIKDAYDEDIDAPYLNFVSGDIPYDKDLEVPGSADFIADSWEQKCAYDGQLSGLLGQYKVKREEEVVTGQIWSMPKYNSRKQGELKERLKHSYSALKKEFRHTFEKLSSDVGDLSEEEKNLLYEQKASAWYQVTYHPHWVKKSLDLQDKSPENLEADSLGSTVMLSFPWIAVDYLARTKIRERQRKSGNFDSTKPVDSLAKFLSERL* 1205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01885 1204 SUPERFAMILY RNA-binding domain, RBD 8 117 IPR035979 GO:0003676
Lapu9g01885 1204 CDD RRM_SF 15 111 - -
Lapu9g01885 1204 PANTHER RNA-DEPENDENT RNA POLYMERASE 11 1198 IPR007855 GO:0003968
Lapu9g01885 1204 Pfam RNA dependent RNA polymerase 420 999 IPR007855 GO:0003968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01885 Lapu-Chr9 33650009 33656171 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01885 K11699 - gmx:100795178 2314.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01885 9 33650009 33656171 Lapu9g01885 9 33650009 33656171 ECH