Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01874 ATGAGCAGACCAGGAGATTGGAACTGCAGGACATGCAACCACCTGAACTTCCAGAGAAGAGAATCGTGTCAGCGATGTGGGGAGCCAAGGAGTGGCAGCGACTACGGTGGGAGCTTCGGTGGCAGAGGCTCTTCCTCTTTTGGCTTCACCACTGGTCCAGATGTTCGTCCCGGTGACTGGTACTGCACTGTGGGAAATTGTGGAGCTCACAACTTCGCCAGTCGCTCCAGCTGCTTTAAGTGTGGTGTCTCCAAGGAGGACTCCAACACTGGATCATACGACTTCGACATCACCCGAATGAGACCCTTTGGCTTTGGTGGCGGCTCCTCCGCCCGCCCTGGCTGGAAATCCGGTGACTGGATATGCACCAGGTCTGGATGCAACGAACACAACTTCGCCAATAGAATGGAGTGCTACAGATGCAATGCACCCAGGGACTCTAGTAGTGGCAGACCTCCCTATTCATCTTAG 471 0.5478 MSRPGDWNCRTCNHLNFQRRESCQRCGEPRSGSDYGGSFGGRGSSSFGFTTGPDVRPGDWYCTVGNCGAHNFASRSSCFKCGVSKEDSNTGSYDFDITRMRPFGFGGGSSARPGWKSGDWICTRSGCNEHNFANRMECYRCNAPRDSSSGRPPYSS* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01874 156 PANTHER ZINC FINGER PROTEIN 53 148 - -
Lapu9g01874 156 ProSitePatterns Zinc finger RanBP2-type signature. 120 141 IPR001876 -
Lapu9g01874 156 Gene3D - 109 148 - -
Lapu9g01874 156 Gene3D - 51 88 - -
Lapu9g01874 156 Gene3D - 2 32 - -
Lapu9g01874 156 ProSiteProfiles Zinc finger RanBP2 type profile. 56 87 IPR001876 -
Lapu9g01874 156 SMART zf_4 118 144 IPR001876 -
Lapu9g01874 156 SMART zf_4 5 29 IPR001876 -
Lapu9g01874 156 SMART zf_4 58 84 IPR001876 -
Lapu9g01874 156 SUPERFAMILY Ran binding protein zinc finger-like 52 88 IPR036443 -
Lapu9g01874 156 FunFam Ran-binding zinc finger protein 106 147 - -
Lapu9g01874 156 ProSitePatterns Zinc finger RanBP2-type signature. 60 81 IPR001876 -
Lapu9g01874 156 FunFam Ran-binding zinc finger protein 50 87 - -
Lapu9g01874 156 ProSiteProfiles Zinc finger RanBP2 type profile. 3 32 IPR001876 -
Lapu9g01874 156 SUPERFAMILY Ran binding protein zinc finger-like 109 148 IPR036443 -
Lapu9g01874 156 ProSiteProfiles Zinc finger RanBP2 type profile. 116 147 IPR001876 -
Lapu9g01874 156 SUPERFAMILY Ran binding protein zinc finger-like 2 32 IPR036443 -
Lapu9g01874 156 Pfam Zn-finger in Ran binding protein and others 56 86 IPR001876 -
Lapu9g01874 156 Pfam Zn-finger in Ran binding protein and others 116 145 IPR001876 -
Lapu9g01874 156 Pfam Zn-finger in Ran binding protein and others 3 30 IPR001876 -
Lapu9g01874 156 ProSitePatterns Zinc finger RanBP2-type signature. 7 26 IPR001876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01874 Lapu-Chr9 33550214 33552444 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01874 - - gmx:100811107 292.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01874 9 33550214 33552444 Lapu9g01874 9 33550214 33552444 ECH