Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01864 ATGATTGTCATGGCACCGTCTGATGAGGTTGAGCTCATGCACATGGCAGTTACTGCTACTCATATCAACGATCAACCGGTCTGCTTTCGGTATCCGAGGGGTGCCCTGGTTGGGAAAGGTTACACTGTAGCCAATGAAATCCCCATCAAGATAGGAAGAGGAAGAGTTCTTGTTGAGGGTAAAGATGTTGCTTTCCTAGGATATGGATCGATGGTTCAGAACTGCCTAAAGGCTCATTCACTCCTTGCAAAACTTGGCATTGAGGTGACTGTTGCTGATGCAAGGTTCTGCAAGCCCCTTGACATCAAACTTCTGAGGCAGCTTTGTAAACATCACTCTTTTCTAATCACTGTGGAGGAAGGATCTATTGGAGGATTTGGTTCCCATGTTGCTGAGTTTATTGTAGTTAATGGACTACTCGATGGAAGAATTAAATGGCGACCCATTGTCTTACCTGACAGGTATATTGAGCATGCATCACCAAATGAATAG 492 0.4472 MIVMAPSDEVELMHMAVTATHINDQPVCFRYPRGALVGKGYTVANEIPIKIGRGRVLVEGKDVAFLGYGSMVQNCLKAHSLLAKLGIEVTVADARFCKPLDIKLLRQLCKHHSFLITVEEGSIGGFGSHVAEFIVVNGLLDGRIKWRPIVLPDRYIEHASPNE* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01864 163 Gene3D - 51 163 IPR009014 GO:0003824
Lapu9g01864 163 FunFam 1-deoxy-D-xylulose-5-phosphate synthase 52 163 - -
Lapu9g01864 163 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 1 62 IPR029061 -
Lapu9g01864 163 PANTHER 1-D-DEOXYXYLULOSE 5-PHOSPHATE SYNTHASE-RELATED 1 163 IPR005477 GO:0008661|GO:0016114
Lapu9g01864 163 Pfam Transketolase, C-terminal domain 52 162 IPR033248 -
Lapu9g01864 163 SUPERFAMILY TK C-terminal domain-like 47 159 IPR009014 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01864 Lapu-Chr9 33487563 33488600 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01864 K01662 - gmx:100793268 308.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01864 9 33487563 33488600 Lapu9g01864 9 33487563 33488600 ECH