Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01843 ATGTCGAACAATTTGGTTTCAGAGCCCATACCCAGTATGCAAATTGCTCGGTTGGAGCCCCTCATGAACAATATTGATTCGTCAGGGAGACAGATGGAAATGGGGATTTTGGGTCCCGTGTCCAGTGATATTGTGTCACAGCCAATGGGAACCTCAAATGAACATGTTGGATTATTGAGAGCCGTGGCTGGTGAATCTAGGTCTCAGGGCTTGCCCCTCTCTAGCGTGCAGAGTGGGCGAGTAGAAGCACAAGCGAGTAATCCAGGAATGCATCAACTTCTTTCCCCTAACAGACAGTCTATGCAAATGGGGAGACTTCCAAATAGTGCAGGGCCTCAGCAGCAGCAGCCAACAACTCCCAAGCGCAAGGCGCCAATGGAACTATCATCCAGTAGTTCCTTTAATAAGCGGGTTGCACAAATGGGAAATAGACCTTGGTTGCAGCAAGTACCTAATGCCTCAAATAGAGGTTCTGCGCAGGTGCAATCCCTGTCAAATGCCTCCAGGACACAGCATTCAGCAGCTTCTAGTAAGAGAAAAACACAGTTGGATAGCACTTCCAGTAAAGCTGGGACGCCTCGGTCTGTGAATTCTAAAAGTCAGAATACCCAGATAAAGCAGTCCTCCAAAGTTCAGACTGAATCATCAGAAAGTGTTAGGTCCAAGATGAGAGAGTCATTAGCTGCTGCTCTGGCCTTGGTTTCTCAGCAAGGTAAATCTCATATCCCAAACAATAATACACCAGCTGATGATACTAGCATTACTCAAGGTAAATTAGGGAACAACTCTCAATGTTCTGGATCAACACCTACATCCATCAATGCTCCACTGGAGCAAAGTATTTCTCAATCAGTTAATTCCTCTTTTGCTGAGGCTAATTCAGTTAGCCGGGTGGTGAGAGAGCCCATGCAGAGTACTCCATTCAAAGAAGATTTTCCAGAAAAATACAAGGACTATGAAGCAGGATCGACAAATGCATCAAACAATGAAAGCATACTGACTTCTATGCAAGTCTTGAACTGTGATAAGCAAGATTTCCAATCATGTTACACTTTGACTACTGATGATGTTCCTTTTAGTGACAGTTTCTTTATGAAAGATGATCTTTTGCAGGGAAATGGTCTTTCCTGGGTATTATCTGATATGGTGGACGTGGGAAATCAAAGGGAAAGTCAAACTAATATAGAGCAGAGATCTGAACCTGAGGAAACTGGTGGAGGTTGTAGGGAGGAGTTACCTTTGCCTGAACTTTTGGCATCAAAAATAGAAGCAGAACTCTTCAAACTGTTTGGAGGTGTGAATAAGAAGTACAAAGAGAAAGGGAGGTCCCTTTTATTTAATTTAAAAGATCGCAATAACCCTGAACTTAGAGAAAGGGTCATGTTTGGTCAAATTCCTCCTGAACAACTATGTTCCATGACTGCAGAGGAACTTGCTTCCAAAGAGCTCTCTCAGTGGCGTATAGCCAAGGCTGAGGAACTTGCTCAAATGGTGGTTTTACCTGATTCAGATGTTGATTTTAGGCGTTTGGTGAAGAAGACTCATAAAGGTGAATTTCAAGTCGAAGTTGAACACGAAGACAATGTATCTGTGGAGGAGGTTTCAGGTGGCACAACCTCAGTGTCTAGAAGCCAAACAGCAAAAAAGGATGTGGAAGGCACTTCTTCCAAACTTGATGTGAACATTGATGCTGAGAAGCGCAATTTACAGAAGGATGATACATTTTCCATTACCATTTCGTCCAACGACGGGACTGATCCCATGCAGGGGCTTATGACTGATGATGCATTGAAGGACCCTGATTTTCTTCCACCAATTGTCTCTCTTGATGAATTCATGGAATCTCTTCATTCTGAGCCACCATTTGAAAATTTACCCCTACAATCTGGCAAAGTGACACCTGCTCCAGACAAGGATGATTCTGGGGTTGGATCTAAGTCAAAATCTTCTGATTTAACTCCAAATGAGCAAGCTGTTGTCATTCCTGACAAGTCTAACAAGTTTGAAAGCACATTTGTGAACTCAGATGCTGTAAAGGAGAAAAAGGCTGATGCTGAATCTAGGATCGGTTCATCTGATACGGGACACAGTGGGAGTCAAGCTGACACGAAGTCAACTGATGGTCTTACCAAGGAAAGGTCAACTGATGATGTGAAGCCTGCATCCAATGATACCGAGTTCAATGGCAATCAGTTTCATGCTGAAGGGAGATACGGTAATGATAATAGGTATTTGAAGGATGCAATCACCACTAAGGGAGAAGGCCTATGGGAGGGAATGCTTCAACCGAATATATCTACCACTCAGTCCGTCATAAGCTTCTATAAGAGTGGCGAGAAAACTGCTGCTAAAGACTGGCCTGGGTTTCTCGAGATCAAGGGAAGGGTCCGACTAGATGCATTTGAGAAATTTCTTCAAGATCTTCGATTGTCTAGGAGTCGTGCAATCATGGTTTCACATTTCGTTTCCAAAGAGTTTGACGAGCAATCAACTCTCCGTGAGGTGGCTGACTCGTATATTTCGGACGAGAGAGTAGGATTTGCTGAGCCTGTGCATGGAGTAGAACTTTACTTTTGCCCACCTCATAAGAAAACAGTTGAAATGCTCAGCAACATACTTCCAAAGGAACAAATTGAGGCAGTTAATTCTATTGATAATGGTCTAATTGGTATTATTGTATGGAGAAAAACTAATTTAACTTCGTCTATATCACCCACCACTGCGACACACCACAAACATAGCTCTAAAAGACAACAATACTTCAGTAGGAGACAGCAAGATATAAATGTGAATGCCAATTCCACCCATAAAGCAGTACCCCCTGCGGACTTTAAGACCATTGAGAATGAGAATGACGACGAAGATGATGTTCCTCCTGGATTTGGGCCACCCGCTGCCCGAGTCGAGGATGACCTGCCGGAGTTTAATTTCTCCAGCAGTTCGATTCCACCACACTTGACCCAAAATCCAAAGGCACTACCAAATACATTACACTCAGTTAACCCAGCCCCACCACCAGCACGCCCTGTAGAACAAATGAGGGAACTTGTATACAAATATGGGCAAAACAAACCAAGTGCACCTTCAGTAAACTGGCAGGATAAATTTGGGGGAACCATTCAACCCTGGAATGATGATGATGATGACATACCTGAATGGCAGCCCCAAACCTCCCAGAATCAGTTTCTTCCCCAACAGACAATGAACAACTTTCATCTTCGACCGCACATTTTGAATCAATCATTCCCGGCTTCACAACAACAGCCAATTATGACACCACAATATCTGCAACCCCCGATGAATGTGACTCATACCCAAAGAAATTTTGACCCTCAGTGGGTTCCTTCTACCCAGGGTACCAACCTACAGCCAAGAGGTGGACCGCCTTACGGAACGCCTGCGCAAGGCTCTACCTGGCCTCAAAATGTCTCTAGAAGTAGGGGATATTAG 3450 0.44 MSNNLVSEPIPSMQIARLEPLMNNIDSSGRQMEMGILGPVSSDIVSQPMGTSNEHVGLLRAVAGESRSQGLPLSSVQSGRVEAQASNPGMHQLLSPNRQSMQMGRLPNSAGPQQQQPTTPKRKAPMELSSSSSFNKRVAQMGNRPWLQQVPNASNRGSAQVQSLSNASRTQHSAASSKRKTQLDSTSSKAGTPRSVNSKSQNTQIKQSSKVQTESSESVRSKMRESLAAALALVSQQGKSHIPNNNTPADDTSITQGKLGNNSQCSGSTPTSINAPLEQSISQSVNSSFAEANSVSRVVREPMQSTPFKEDFPEKYKDYEAGSTNASNNESILTSMQVLNCDKQDFQSCYTLTTDDVPFSDSFFMKDDLLQGNGLSWVLSDMVDVGNQRESQTNIEQRSEPEETGGGCREELPLPELLASKIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVMFGQIPPEQLCSMTAEELASKELSQWRIAKAEELAQMVVLPDSDVDFRRLVKKTHKGEFQVEVEHEDNVSVEEVSGGTTSVSRSQTAKKDVEGTSSKLDVNIDAEKRNLQKDDTFSITISSNDGTDPMQGLMTDDALKDPDFLPPIVSLDEFMESLHSEPPFENLPLQSGKVTPAPDKDDSGVGSKSKSSDLTPNEQAVVIPDKSNKFESTFVNSDAVKEKKADAESRIGSSDTGHSGSQADTKSTDGLTKERSTDDVKPASNDTEFNGNQFHAEGRYGNDNRYLKDAITTKGEGLWEGMLQPNISTTQSVISFYKSGEKTAAKDWPGFLEIKGRVRLDAFEKFLQDLRLSRSRAIMVSHFVSKEFDEQSTLREVADSYISDERVGFAEPVHGVELYFCPPHKKTVEMLSNILPKEQIEAVNSIDNGLIGIIVWRKTNLTSSISPTTATHHKHSSKRQQYFSRRQQDINVNANSTHKAVPPADFKTIENENDDEDDVPPGFGPPAARVEDDLPEFNFSSSSIPPHLTQNPKALPNTLHSVNPAPPPARPVEQMRELVYKYGQNKPSAPSVNWQDKFGGTIQPWNDDDDDIPEWQPQTSQNQFLPQQTMNNFHLRPHILNQSFPASQQQPIMTPQYLQPPMNVTHTQRNFDPQWVPSTQGTNLQPRGGPPYGTPAQGSTWPQNVSRSRGY* 1150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01843 1149 MobiDBLite consensus disorder prediction 1106 1149 - -
Lapu9g01843 1149 MobiDBLite consensus disorder prediction 532 549 - -
Lapu9g01843 1149 MobiDBLite consensus disorder prediction 1134 1149 - -
Lapu9g01843 1149 MobiDBLite consensus disorder prediction 706 720 - -
Lapu9g01843 1149 MobiDBLite consensus disorder prediction 388 409 - -
Lapu9g01843 1149 SUPERFAMILY Elongation factor TFIIS domain 2 415 482 IPR036575 GO:0006351
Lapu9g01843 1149 MobiDBLite consensus disorder prediction 68 134 - -
Lapu9g01843 1149 Gene3D - 390 481 IPR036575 GO:0006351
Lapu9g01843 1149 CDD SPOC_TFIIS 756 894 - -
Lapu9g01843 1149 MobiDBLite consensus disorder prediction 646 660 - -
Lapu9g01843 1149 Pfam Transcription factor S-II (TFIIS), central domain 409 494 IPR003618 GO:0006351
Lapu9g01843 1149 ProSiteProfiles TFIIS central domain profile. 384 506 IPR003618 GO:0006351
Lapu9g01843 1149 MobiDBLite consensus disorder prediction 947 968 - -
Lapu9g01843 1149 MobiDBLite consensus disorder prediction 1106 1125 - -
Lapu9g01843 1149 MobiDBLite consensus disorder prediction 619 664 - -
Lapu9g01843 1149 SMART mid_6 386 489 IPR003618 GO:0006351
Lapu9g01843 1149 MobiDBLite consensus disorder prediction 67 134 - -
Lapu9g01843 1149 MobiDBLite consensus disorder prediction 148 223 - -
Lapu9g01843 1149 MobiDBLite consensus disorder prediction 676 738 - -
Lapu9g01843 1149 MobiDBLite consensus disorder prediction 237 256 - -
Lapu9g01843 1149 MobiDBLite consensus disorder prediction 577 597 - -
Lapu9g01843 1149 MobiDBLite consensus disorder prediction 148 216 - -
Lapu9g01843 1149 Pfam SPOC domain 753 894 IPR012921 -
Lapu9g01843 1149 MobiDBLite consensus disorder prediction 235 256 - -
Lapu9g01843 1149 MobiDBLite consensus disorder prediction 530 554 - -
Lapu9g01843 1149 MobiDBLite consensus disorder prediction 690 705 - -
Lapu9g01843 1149 PANTHER TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN 114 978 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01843 Lapu-Chr9 33294593 33300866 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01843 - - vum:124825671 2008.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01843 9 33294593 33300866 Lapu9g01843 9 33294593 33300866 ECH