Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01819 ATGGCCATTCTCCACTGCACCCCACTTCCATTTCTTTCCCTCAGAACCGGTTTAACCTCAACGCTGACAAACCCAACAACAACAAGAAACCCGTTGTTCCTGGCGATGAGCACGTTCGCGAAATTCGAACCCGTGTCGTCCTCAGCCTCTTCTTCTTCAACGTACGAGGTGCCAGAGGTAGATGCTAACGACATGGACCGCGTAGCAGACAACACGTTCCGAAGGTACACGTTGAACACCAAGAGGAGTGGTAAAGGAACGGCCATTGTGTGGTTCAGGAATGATCTCAGAGTTTTGGACAATGAGGCTCTCTATAAGGCATGGCTTTCCTCCGAAACCGTGTTACCTGTCTACTGCGTTGACCCCCGACTTTTTGCCACTACTTATCATTTCGGCTTTCCCAAAACCGGTGCATTGAGAGCGCAATTTCTCCTTGATTGCTTGGTTGACTTGAGGAAGAATTTGATGAAAAAAGGACTTAATTTGCTTGTACAACATGGAAAGCCTGAGGAGATTCTTCCTTCTCTTGCCAAAACATTTCAAGCTCACACAGTGTATGCACAGAAAGAAACGTGCAGTGAGGAGCTGAACGTTGAAAGGTTAGTCATCGGAGGTCTTAAACAAGTTGTGACATCAACTGAAGAATCCAGTGGTGTCACAGTTTCGAACAACGTCACTAAATTGCAATTAGTTTGGGGTACCACCATGTACCACCTTGATGATCTCCCTTTTGATGCCACTTCTTTGCCAGATGTGTATACTCAATTTCGCAAGATTGTTGAAGCTAAATGTACCATACGCTCGTGCATCAAGCTACCAGCTTCTCTTGGACCACCTCCATTAATTGAGGATTGGGGATGCCTTCCTTCATTAGAGCAACTTGGACTTTGCTCACAGAATGTTATCAAGGGAATGAAGTTTGTGGGGGGTGAAACTGCGGGATTGAACAGAGTATACGAATACTTCTGGAAGAAGGATTTGCTGAAGGTATATAAAGAGACCAGGAATGGGATGTTAGGGCCTGATTATTCTACCAAATTCTCACCATGGCTTGCTTCAGGAAGTTTGTCTCCTCGTTTCGTATATGAAGAGGTGAAGAGATATGAGAACGAAAGACTAGCAAATAGTTCTACGTACTGGGTTTTGTTCGAGTTGATATGGAGGGATTACTTTAGGTTTTTGTCAGTGAAATATGGGAATTCGCTTTTCCATATAGGTGGCCCTAGGAAAGTTCATCGCAACTGGAGCCAAGACAAGAATTTGTTTGAAGCCTGGAGGGATGGTTGTACGGGGTATCCTCTCATAGATGCCAACATGAAAGAACTATCGACTACAGGATTTATGTCTAATCGAGGGCGGCAGATTGTATGCTCCTTTCTTGTTCGTGACATGGGCATTGATTGGCGCATGGGAGCAGAATGGTTTGAGACGTGTCTTTTGGATTATGATCCATGTTCTAATTATGGAAACTGGACTTACGGATCAGGAGTTGGGAATGATCCGAGAGAAGATAGGTATTTCAGCATTCCAAAACAAGCACAAACATATGATCCTGAAGGTGAGTATGTTGCATACTGGTTGCCACAGTTGCGAAAAATCCAAAAGGAGAAAAGGAACTTCCCTGGAAATATGTACATTCCTCAAATTGTGGCTCTCAAGTTTGGAACAGCTAGTGGAAACAATAGAGATAAGTCCCATGGTGCAACAAGAATCAACCATAGAGGAAATGAAAGAAAATGGAACAGAAGATAA 1752 0.4401 MAILHCTPLPFLSLRTGLTSTLTNPTTTRNPLFLAMSTFAKFEPVSSSASSSSTYEVPEVDANDMDRVADNTFRRYTLNTKRSGKGTAIVWFRNDLRVLDNEALYKAWLSSETVLPVYCVDPRLFATTYHFGFPKTGALRAQFLLDCLVDLRKNLMKKGLNLLVQHGKPEEILPSLAKTFQAHTVYAQKETCSEELNVERLVIGGLKQVVTSTEESSGVTVSNNVTKLQLVWGTTMYHLDDLPFDATSLPDVYTQFRKIVEAKCTIRSCIKLPASLGPPPLIEDWGCLPSLEQLGLCSQNVIKGMKFVGGETAGLNRVYEYFWKKDLLKVYKETRNGMLGPDYSTKFSPWLASGSLSPRFVYEEVKRYENERLANSSTYWVLFELIWRDYFRFLSVKYGNSLFHIGGPRKVHRNWSQDKNLFEAWRDGCTGYPLIDANMKELSTTGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGSGVGNDPREDRYFSIPKQAQTYDPEGEYVAYWLPQLRKIQKEKRNFPGNMYIPQIVALKFGTASGNNRDKSHGATRINHRGNERKWNRR* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01819 583 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 86 221 IPR006050 -
Lapu9g01819 583 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 303 541 IPR036134 -
Lapu9g01819 583 Gene3D DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 404 558 - -
Lapu9g01819 583 Pfam FAD binding domain of DNA photolyase 383 541 IPR005101 -
Lapu9g01819 583 NCBIfam DASH family cryptochrome 87 529 IPR014133 GO:0003913|GO:0006281
Lapu9g01819 583 Pfam DNA photolyase 88 270 IPR006050 -
Lapu9g01819 583 Gene3D - 234 403 - -
Lapu9g01819 583 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 85 284 IPR036155 -
Lapu9g01819 583 Gene3D HUPs 52 233 IPR014729 -
Lapu9g01819 583 PRINTS DNA photolyase signature 450 468 IPR002081 -
Lapu9g01819 583 PRINTS DNA photolyase signature 489 503 IPR002081 -
Lapu9g01819 583 PRINTS DNA photolyase signature 430 446 IPR002081 -
Lapu9g01819 583 PANTHER CRYPTOCHROME 86 544 IPR002081 -
Lapu9g01819 583 MobiDBLite consensus disorder prediction 560 583 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01819 Lapu-Chr9 33031251 33035987 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01819 K25656 - gmx:100783312 1045.03