Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01815 ATGCAAGGGAAAGAAATGGAAGGGTTGTCGTCTTCATCGGCGATCGCACAGAAAACATGGGAGCTCGAGAACAACATCATCCCCATGGACACTCCGGGCGCCGCCGCCCCCTCCTCCACCGCCAACGCCGCCAACGCAGATGACTCCATATTCTACTACGACGAGGCCGGCCAGAACGAGTTCCAGCGCGACAAGCCCTGGGCCAATGACCCTCACTACTTCAAGCGCGTCAAGATCTCCGCACTCGCGCTGCTCAAGATGGTCGTCCACGCGCGCTCCGGCGGCACTATCGAGGTCATGGGCCTCATGCAGGGCAAGACCGACGCCGACGCCATCATCGTCATGGACGCCTTCGCTCTCCCCGTCGAAGGCACCGAAACGCGCGTTAATGCTCAGGCCGATGCGTACGAGTACATGGTCGATTATTCTCAGACAAACAAACAGGCTGGGCGGTTAGAGAATGTTGTGGGATGGTATCACTCTCATCCTGGGTACGGATGCTGGCTGTCGGGGATCGATGTTTCGACGCAGATGCTGAATCAGCAGTTTCAGGAGCCGTTTCTGGCGGTTGTGATTGATCCCACGAGGACTGTTTCGGCGGGGAAGGTTGAGATTGGGGCTTTCAGAACTTACCCTGAAGGGTATAAGCCTCCGGATGAGCCAATTTCTGAGTATCAAACTATTCCTCTCAATAAGATTGAGGACTTTGGTGTCCACTGTAAACAGTATTATGCCTTGGATATCACTTACTTTAAGTCATCTCTTGATTCACACCTCTTGGATCTTCTGTGGAACAAGTATTGGGTGAATACATTGTCATCTTCTCCTTTGTTGGGTAATGGAGATTATGTTGCAGGGCAAATCTCTGATTTAGCTGAGAAGCTAGAACAAGCGGAGAATCAGTTGGCACACTCACGCTTTGGGCCACTAATAGCACCGACACCTAGAAAGAAAGAGGAAGAATCTCCACTTGCTAAAATTACTCGCGACAGCGCAAAAATAACTGTGGAGCAAGTGCATGGCCTGATGTCACAGGTCATCAAGGACATTTTGTTTAACTCCGTCCATCAAGCAAATAGAAGTCGCACTGAACCATCTGGTCCTGAACCAATGATTGAAAGCTGA 1125 0.5129 MQGKEMEGLSSSSAIAQKTWELENNIIPMDTPGAAAPSSTANAANADDSIFYYDEAGQNEFQRDKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDADAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDSHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRFGPLIAPTPRKKEEESPLAKITRDSAKITVEQVHGLMSQVIKDILFNSVHQANRSRTEPSGPEPMIES* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01815 374 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 74 185 IPR000555 GO:0005515|GO:0008233|GO:0008237
Lapu9g01815 374 Gene3D Cytidine Deaminase, domain 2 9 279 - -
Lapu9g01815 374 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED 63 360 - -
Lapu9g01815 374 ProSiteProfiles MPN domain profile. 77 214 IPR037518 -
Lapu9g01815 374 Pfam Cop9 signalosome subunit 5 C-terminal domain 273 353 IPR040961 -
Lapu9g01815 374 FunFam COP9 signalosome complex subunit 5 10 279 - -
Lapu9g01815 374 SUPERFAMILY JAB1/MPN domain 76 213 - -
Lapu9g01815 374 SMART pad1_6 76 213 IPR000555 GO:0005515|GO:0008233|GO:0008237
Lapu9g01815 374 CDD MPN_RPN11_CSN5 66 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01815 Lapu-Chr9 32984051 32992346 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01815 K09613 - gmx:100817371 732.25