Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01799 ATGGCAGGGTTAAATTTTGAAGCCACATATACTGACAACCATGATATTCTGAAGATATTTGAAGGTGAAGGTGTTGAGTTCCTTTTATCTTCTGAAGGGAAGGTACCTGTGTCAGAATGCAGTGGGAAAGTCATCTGCCTGTTTTTCAGTGCAAACTGGTGCAGGCCTTGCCGAGCTTTCACTCCCCATCTTGTTGAACTTTATGAAACACTGAGAAAGAGGGGAATAAATCTAGAGATCATCTTCATCTCCTTTGACCGCGATGAGGATGGATTTAAAGAACACTTCAAGAGTATGACATGGCTAGCTGTCCCATTTGATGTAAATTTGCACAGAAGACTGATTGACAGATACAGAGTGGATCGAATTCCATCATTTATTCCATTATGTTCAGATGCCATAACTTTTGAAGAAGACTTGATTGGATGCATTGAGGATTATGGTGCTGATGCATTTCCTTTCACTAGGAAGAGACTCGAGGAATTGAAAGCCATAGATAAAAGGAAGCGTGAGGAAGCAAACTTGGAAGAACTATTGGGACATGAAGGACGCAACTTTCTCATCTCTGGAGATGATAGAAAGGTGCCCATACGTGAAGTAGTTGGTAAAACCATAGGCCTGTATTTTTGTGCCTACTGGTCTCCTCCTTGTTGTGCCTTTACTGTCCAACTTACAGATGCGTACAACAAAGTCAAGGCTGCAAAAGGTGACTGCTTTGAGATTGTTTTAATATCAACAGATAGGGACCTTGATGAATTCAATGTCAACAAAAGTAGTATGCCATGGCTTGCTGTTCCATATGAGGACAGAACAAGGCAAGACCTTAGAAGAATCTTTAATATAAAGGGCATTCCTGCTTTGGTTTTCATTGGACCTGATGGCAAAGTCATTAGTGTGAATGGCAAGTTTATGGTCTCCTCATATGGTGCAGAAGCTTTCCCATTTACCGAATCACGGATAAGAGACCTAGAAGCAGCTCTGAGAAAGGAAGGGGAGGCTTTGCCTCAGCAGGTTGAGGATGTCAAGCATGAACATGTGTTAAAATTGGATACGGCCAAAGCATATGTATGTGATTCCTGTAGAAAGCAAGGGAAGTTCTGGACATTCTCTTGTGATGTCTGTGACTATGACCTACACCCAAGTTGTCTAGAAAAGGCCAACTAG 1164 0.4184 MAGLNFEATYTDNHDILKIFEGEGVEFLLSSEGKVPVSECSGKVICLFFSANWCRPCRAFTPHLVELYETLRKRGINLEIIFISFDRDEDGFKEHFKSMTWLAVPFDVNLHRRLIDRYRVDRIPSFIPLCSDAITFEEDLIGCIEDYGADAFPFTRKRLEELKAIDKRKREEANLEELLGHEGRNFLISGDDRKVPIREVVGKTIGLYFCAYWSPPCCAFTVQLTDAYNKVKAAKGDCFEIVLISTDRDLDEFNVNKSSMPWLAVPYEDRTRQDLRRIFNIKGIPALVFIGPDGKVISVNGKFMVSSYGAEAFPFTESRIRDLEAALRKEGEALPQQVEDVKHEHVLKLDTAKAYVCDSCRKQGKFWTFSCDVCDYDLHPSCLEKAN* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01799 387 PANTHER THIOREDOXIN 7 335 - -
Lapu9g01799 387 Coils Coil 156 176 - -
Lapu9g01799 387 Pfam C1 domain 342 382 IPR004146 -
Lapu9g01799 387 Gene3D Glutaredoxin 22 158 - -
Lapu9g01799 387 ProSiteProfiles Thioredoxin domain profile. 177 325 IPR013766 -
Lapu9g01799 387 ProSiteProfiles Thioredoxin domain profile. 16 171 IPR013766 -
Lapu9g01799 387 SUPERFAMILY Cysteine-rich domain 334 383 IPR046349 -
Lapu9g01799 387 Gene3D Glutaredoxin 180 317 - -
Lapu9g01799 387 SUPERFAMILY Thioredoxin-like 31 129 IPR036249 -
Lapu9g01799 387 SUPERFAMILY Thioredoxin-like 189 298 IPR036249 -
Lapu9g01799 387 Pfam Thioredoxin-like 42 127 IPR012336 -
Lapu9g01799 387 Pfam Thioredoxin-like 202 296 IPR012336 -
Lapu9g01799 387 CDD TryX_like_TryX_NRX 185 315 IPR045870 GO:0004791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01799 Lapu-Chr9 32815728 32824774 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01799 K17609 - gmx:100778160 732.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01799 9 32815728 32824774 Lapu9g01799 9 32815728 32824774 ECH