Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01798 ATGAGTTGGTGTGATGGCGTTCAGGAGCCACGCGTTCTGATCGCTCCTGATCCTGGTACCGATGGAAATGGTCTGGGACAGATGATATTGCTCCGCCATCCCAAATCTGGAAATGCAACGCAGTATCTGTTTGCAAATGGAATGCTTCAGGAATTTCAGTGGTTTAAGAACTTGTATGGATCTTGGTTTTTGGGAGATTATGTGACTGAAGATGGTCGGTTGTATTTATCCACGCCAATTGATCCTGTTTTCATCATGTTGCCTATATTTGAGGAAGCTAGAATGAAGAAAGGGGATGATGATCTTGGGAGGTTCAGGCAATTGGATGAGATATTATTTATTGATGGGTATCCAGGATATATGCAGTTAATGTCTGTTGTGGAGAACTGTATGCAAGTTGTTTCTGAAGTCAAAGGTGACTTTGGATCCTCAAAATTCTTCAGACTTGATGACTCAAAGGTTCTACGTTGGCTGTGCTATAAGGTTTGTCAGCTAAAACAGACACTACCCAATTTGGACAAAAACTATGCTGTTCAATCAGAGAAAGACACATTGATTGGTGCAGTCTCTATATTAGGAGAGTATTTCGAGGAAAAGCCTTGGTTGCAGCTTTTGTGTAACCATATTAAGTTAAATATACTTGAGGTTACTGGAAAAGCACAAGTAAACGCTGAAGGAACTAACCCAAGTTTATGTAATGAATTACAGGAACAACAGAGTCAAGACAAGAAGACTACAGCTGCAAAGAAAGGTAGGCAAGCGAAGAAGGTAAAATTGGAGACAGAATCACACAACATCAAAGAGATGTTCACGAGGGCCTCCCGAAAGAAAAGCTAA 837 0.4086 MSWCDGVQEPRVLIAPDPGTDGNGLGQMILLRHPKSGNATQYLFANGMLQEFQWFKNLYGSWFLGDYVTEDGRLYLSTPIDPVFIMLPIFEEARMKKGDDDLGRFRQLDEILFIDGYPGYMQLMSVVENCMQVVSEVKGDFGSSKFFRLDDSKVLRWLCYKVCQLKQTLPNLDKNYAVQSEKDTLIGAVSILGEYFEEKPWLQLLCNHIKLNILEVTGKAQVNAEGTNPSLCNELQEQQSQDKKTTAAKKGRQAKKVKLETESHNIKEMFTRASRKKS* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01798 278 CDD RNase_H2-B 12 167 IPR040456 GO:0032299
Lapu9g01798 278 MobiDBLite consensus disorder prediction 243 272 - -
Lapu9g01798 278 Pfam Ydr279p protein family (RNase H2 complex component) wHTH domain 84 172 IPR019024 -
Lapu9g01798 278 MobiDBLite consensus disorder prediction 235 278 - -
Lapu9g01798 278 Gene3D - 10 79 - -
Lapu9g01798 278 Pfam Ydr279p protein triple barrel domain 28 81 IPR041195 -
Lapu9g01798 278 PANTHER RIBONUCLEASE H2 SUBUNIT B 3 276 IPR040456 GO:0032299
Lapu9g01798 278 Gene3D - 80 210 - -
Lapu9g01798 278 FunFam Ribonuclease H2 subunit B 9 79 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01798 K10744 - gmx:100305835 501.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01798 9 32808779 32813244 Lapu9g01798 9 32808779 32813244 ECH