Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01758 ATGCTCGTGGGCCCTGATTGGGCTTTGAACATGGAGATCTGTGACATACTCAATCGCGACCCTGGGCAAGCAAAGAGTGTTGTTAAAGGCATAAAGAAGCGGCTTGGAAGTAAAGTTCCTAGAGTTCAAATTATTGCACTGACTCTGTTGGAGACAATCATTAAGAATTGTGGAGACATTATCCACATGCATGTTGCCGAGAGAGATGTTCTTCATGAGATGGTGAAAATAGTGAAGAAGAAGACTGATTATCATGTCCGAGAGAAGATATTGGTTCTTATAGATACTTGGCAAGAGGCTTTTGGAGGGCCAAGAGCAAGATATCCACAGTATTATGCAGCATACCAGGAGCTTTTGCGTGCTGGGGCAGTATTCCCTCAGAGGTCTGAGCGATCTGCACCTGTATTCACGCCGCTACAAACACAACCATTGTCGTCATACCCTCAAAATTTACGAGATACTGTTGCTCCGCAAGACACAACTGAGTCCTCGGCTGATTCTGAGTTTCCAGCCCTAAGTTTGTCAGAAATTCAAAATGCACGTGGTATTATGGATGTTCTTGCAGAAATGCTCAATGCATTAGACCCTGGTAACAAAGAAGGTCTTATGCAGGAAGTTATTATTGATTTAGTGGAGCAATGTCGAGCATACAAGCAGAGAGTGGTACACCTTGTTAATTCAACTTCGGACGAGTCATTGCTATGCCAAGGCCTATCTCTGAATGATGATCTTCAGCGTGTCCTGGCGAAGCACGAATCCATCGCTTCGGGAACTTCTACTTCAGGAACTACTTCTCAAAATCATACTGAGAATCCAAAGCCTGCACCTACTAGAGAACTTGTAGATTTCGATGGTCCTTTGGTTGATTTTGGAGATACCAGTAATGAAAGGTCGTCTGCTAATGCTGAAACTGGGTCTCAATCATTGAATCAGTTACTGCTTCCTGCGCCCCCAACCTCAAATGGATCTGCTCCCCCTGCAAAGGCTGATCCTAAAGTGGACCTGCTCAGTGGTGACGACTATAACTCACCAAAAGCAGAGACTTCACTTGCTCTTGTTCCCTTAGGCGAACAGCAGCCAGCCAGCCCTATGTCTCAACAGAATGCCCTTGTTCTTTTTGATATGTTTTCTAATGGAAGCAATCCACCTACTTCCGTTAATACCCAGCCAATTAATGTTGCCGGCCAAACCAGTCCGTTTTCTCCTCAATTTCAACAACAGCAGACTTTCATATCTCAAGGGGTGTTTTACCCCAATGGAGGTGTGCCAAATGTGGGGTCACCTCGGTATGAGCAATCACCTTATATGCAGAGCATAGGTCCTTCTTGGAATGGTCAGGTTGCGCAGCAGCAACAGCCTCCTTCTCCAGTTTATGGCACAACAAGTGGTGGATCATTTCCGCCACCTCCCTGGGAAGCTCAACCTACAGACAATGATAGTCCAGTAGCAGGCAGTCAATACCCACAACCATTACAAGTCACTCAAGTGGTTATGACGCATATACAAAGTGCTGCACATCCTCAGGGACCTCAAGCAGCGGGGCATGACCAGGCTGTTGGAATGTATATGCAGCCAAATGCTAGCCATGTGTCATCTATCAACAGCAATGCTCAAAGCAATCAATCAGGCTTGTACCCGCAACATAATCAGGGTGTTTCCAGTCCCTATATGGGTATGGCTTCACATCCAACGCATTCCATGTATCCTCAACAGATGTACGGCAACCAATTCGTAGGATATGGCTATGATCAGCAACCAGGGGTTCAATATGTTGAGCGGCAAATGTATGGTTTATCAGTGAGAGATGATGGTGCAATGAGAAATTCTTACCAGGTTTCTTCTGCATCCTATGTGCCATCTGGGAAGCCTTCCAAACCAGAGGATAAGTTATTTGGGGACCTTGTTAACCTGGCAAAAGTGAAACCAAAACCTACTGCTGACCGAACTGGTAGCATGTGA 1959 0.4569 MLVGPDWALNMEICDILNRDPGQAKSVVKGIKKRLGSKVPRVQIIALTLLETIIKNCGDIIHMHVAERDVLHEMVKIVKKKTDYHVREKILVLIDTWQEAFGGPRARYPQYYAAYQELLRAGAVFPQRSERSAPVFTPLQTQPLSSYPQNLRDTVAPQDTTESSADSEFPALSLSEIQNARGIMDVLAEMLNALDPGNKEGLMQEVIIDLVEQCRAYKQRVVHLVNSTSDESLLCQGLSLNDDLQRVLAKHESIASGTSTSGTTSQNHTENPKPAPTRELVDFDGPLVDFGDTSNERSSANAETGSQSLNQLLLPAPPTSNGSAPPAKADPKVDLLSGDDYNSPKAETSLALVPLGEQQPASPMSQQNALVLFDMFSNGSNPPTSVNTQPINVAGQTSPFSPQFQQQQTFISQGVFYPNGGVPNVGSPRYEQSPYMQSIGPSWNGQVAQQQQPPSPVYGTTSGGSFPPPPWEAQPTDNDSPVAGSQYPQPLQVTQVVMTHIQSAAHPQGPQAAGHDQAVGMYMQPNASHVSSINSNAQSNQSGLYPQHNQGVSSPYMGMASHPTHSMYPQQMYGNQFVGYGYDQQPGVQYVERQMYGLSVRDDGAMRNSYQVSSASYVPSGKPSKPEDKLFGDLVNLAKVKPKPTADRTGSM* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01758 652 MobiDBLite consensus disorder prediction 254 273 - -
Lapu9g01758 652 ProSiteProfiles GAT domain profile. 168 256 IPR004152 GO:0035091|GO:0043130
Lapu9g01758 652 PANTHER TOM1-LIKE PROTEIN 1 644 IPR044836 GO:0035091|GO:0043130|GO:0043328
Lapu9g01758 652 MobiDBLite consensus disorder prediction 440 462 - -
Lapu9g01758 652 CDD VHS 1 120 - -
Lapu9g01758 652 CDD GAT_GGA-like_plant 176 254 - -
Lapu9g01758 652 SUPERFAMILY ENTH/VHS domain 2 126 IPR008942 -
Lapu9g01758 652 FunFam TOM1-like protein 2 1 136 - -
Lapu9g01758 652 Gene3D - 1 136 IPR008942 -
Lapu9g01758 652 MobiDBLite consensus disorder prediction 292 318 - -
Lapu9g01758 652 MobiDBLite consensus disorder prediction 142 167 - -
Lapu9g01758 652 SMART VHS_2 1 122 IPR002014 GO:0035091|GO:0043130
Lapu9g01758 652 MobiDBLite consensus disorder prediction 254 331 - -
Lapu9g01758 652 MobiDBLite consensus disorder prediction 440 487 - -
Lapu9g01758 652 Pfam GAT domain 182 256 IPR004152 GO:0035091|GO:0043130
Lapu9g01758 652 Gene3D - 170 264 IPR038425 -
Lapu9g01758 652 SUPERFAMILY GAT-like domain 129 257 - -
Lapu9g01758 652 ProSiteProfiles VHS domain profile. 1 126 IPR002014 GO:0035091|GO:0043130
Lapu9g01758 652 Pfam VHS domain 3 117 IPR002014 GO:0035091|GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01758 Lapu-Chr9 32444568 32458452 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01758 - - gmx:100805762 1070.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01758 9 32444568 32458452 Lapu9g01758 9 32444568 32458452 ECH